KEGG   Actinokineospora sp. UTMC 2448: Actkin_01616
Entry
Actkin_01616      CDS       T08397                                 
Name
(GenBank) putative ATP-dependent helicase Lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
actu  Actinokineospora sp. UTMC 2448
Brite
KEGG Orthology (KO) [BR:actu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:actu03400]
    Actkin_01616
Enzymes [BR:actu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Actkin_01616
    5.6.2.6  RNA 3'-5' helicase
     Actkin_01616
DNA repair and recombination proteins [BR:actu03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Actkin_01616
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_2nd_Lhr WHD_4th_Lhr DEAD WHD_3rd_Lhr Helicase_C ResIII AAA_25 DUF6406 Mg_chelatase T4SS-DNA_transf
Other DBs
NCBI-ProteinID: UVS77893
LinkDB
Position
complement(1686576..1691135)
AA seq 1519 aa
MSSDVLDVFSPATRQWFTGAFAAPTAAQAGAWQAAAAGEHALVVAPTGSGKTLAAFLWAL
DRLATDGPPAEAKHRCRVLYVSPLKALAVDVQRNLRAPLAGIRQAAHRLGLPEPDITVGM
RTGDTPADERRAFARTPPDVLVTTPESLFLILTSAARESLRGVRTVIVDEVHAVAGAKRG
AHLALSLERLDALLESPAQRIGLSATVRPVEEVSAFLCGGRPVTVVRPASAKTIEVRVEV
PVEDMSRLDEQPPMSEEDGIRPPPRNSIWPSVERRVLELVRGHRSTIVFANSRRLAERMT
ARLNELAEEEVPDLDRFPAEAIGQSGLARTTTPVVARAHHGSMSREQRTMVEEDLKAGRL
PCVVATSSLELGIDMGAVDLVVQVESPPTVAAGLQRVGRAGHQVGAVSRGVMYPKFRGDL
VSCAVVAERMSAGAIEAVRYPRNPLDVLAQHIVAMTAVEPWTVDELASVVRRAAPYAALP
DSALYAVLDMLAGRYPSEEFGELRPRVTWDRISGELRGRPGAQRLAVTSGGTIPDRGLFA
VMTPGDEGRPGSRVGELDEEMVYESRVGDTFLLGTSAWRVEDITHDRVIVTPAPGEPARM
PFWKGDSPGRPLELGRAQGAFLRELAAAEPAAARERAAAAGLDAWATDNLLAYLAEQREA
TRHIPDDRTLLVERFRDELGDWRLVVHSPFGAQVNAPWALAIGARLRESRGVDAQIAHSD
DGIVVRLPDTVDDSGRELVAGAEDVILAPEEVEQVIVAEVGGSALFASRFRECAARSLLL
PRRDPRRRTPLWQQRQRSAQLLSVASKYEQFPVVLEAMRECLQDVYDVAGLRELMTDVRA
RRVRVVEVQTQSASPFARSLLFGYIGMFLYGEDVPLAERRAAALSLDSALLAELLGSEAI
RELLDPEIVAEVERSLQRLTPERHARHAEDAADLLRFLGDLSEAEAAERGVRPEWLAELQ
QARRALRVRIGGEERYIAIEDAGRVRDALGTALPVGVPEVFTEPVPDPLGDLLSRYARTH
GPFPAAEAAERFGLGVSVVTGVLERLAGSGRLVRGELRPGGTHTEFCDADVLRRLRRASL
ARLRAEVEPVEPAALGRFLPGWHGVGRKQRGLPTADDVLSVIEQLAGAPLPASALESLVL
PARLPGYSPALLDELTATGEVTWCGTGSLAGGDGWLALAPSDVADLLLPDVEEAVPDTPL
HGAVLSALDGGALFFRQLADRASAVLLDGGAEAPGDADVIAALWDLVWGGLVTNDTLAPL
RAVLSGGGAHRPRRSAPRGRYARMRAARPSMPSRTGPPTVAGRWSLVPDRETETTRRAHA
RAEAFLERHGVLTRGALDTERVTGGFSGVYKVLRAMEESGQIIRGYVVEGLGAAQFASRG
AVDRLRALSRSDDAVVDAEAVVLAAADPAQPYGAALPWPDPVGAGGHRPARKAGALAVLV
DGTPALYVERGGRTLLSFTEAEATLRSAAEGLSRAVRDGWLGELSVQRADGEVALTSSLA
DVLREAGFRATPKGLRLRG
NT seq 4560 nt   +upstreamnt  +downstreamnt
gtgagcagcgacgttctcgacgtgttcagcccggccaccaggcagtggttcaccggggcc
ttcgccgcgcccaccgccgcgcaggcgggggcgtggcaggcggccgcggcgggcgagcac
gcgttagtcgtcgcccccacgggctccggcaagacgctggcggcgttcctgtgggcgctg
gaccggctggcgaccgatggaccgcccgccgaggccaagcaccggtgccgggtgctgtac
gtgtccccgctgaaggcgctggcggtggacgtgcagcgcaacctgcgggcgccgctggcg
ggcatccgccaggccgcgcaccggctcggcctgcccgagccggacatcacggtgggcatg
cgcacgggcgacacccctgcggacgagcggcgcgcgttcgcccggaccccgcccgacgtg
ctggtcacgacgccggaatcgctgttcctgatcctcacctccgcggccagggagtcgctg
cgcggggtccggacggtgatcgtcgacgaggtccacgccgtcgcgggcgccaagcgcggc
gcgcaccttgccctgtcgctggagcggctcgacgccctactggagtccccggcccagcgg
atcgggctgtcggcgacggtgcggccggttgaggaggtgagcgcgttcctgtgcggcggg
cggccggtgacggtggtgcggcccgcgtcggccaagacgatcgaggtgcgggtggaggtg
ccggtcgaggacatgtcccggctggacgagcagccgcccatgagcgaggaggacggcatc
cggccgccgccgaggaactcgatctggccgtcggtggagcggcgcgtgctggagctggtc
cgcgggcaccggtcgacgatcgtgttcgccaactcgcggcggctggcggagcggatgacc
gcccggctcaacgagctggccgaggaggaggtgcccgacctggaccgcttccccgcggag
gccatcgggcagtcggggctggcgcggacgaccacgcccgtggtggcgcgggcccaccac
gggtccatgtcgcgcgagcagcggacgatggtggaggaggacctgaaggcgggccgcctg
ccgtgcgtggtggcgacctcgtcgctggagctgggcatcgacatgggcgcggtcgacctg
gtggtgcaggtcgagtcgccgccgacggtggcggccgggctgcagcgggtgggccgggcc
gggcaccaggtgggcgcggtgtcgcgcggggtgatgtacccgaagttccgcggcgacctc
gtctcctgcgcggtggtcgccgagcggatgtcggcgggcgcgatcgaggccgtgcgctac
ccccgcaacccgctcgacgtgctggcccagcacatcgtggcgatgacggcggtggagccg
tggacggtggacgagctggcgtcggtcgtgcggcgggcggccccgtacgcggcgctgccc
gactcggcgctgtacgcggtgctggacatgctcgcggggcggtacccgtcggaggagttc
ggcgagctgcgtccgcgcgtcacctgggaccggatctccggggagctgcgcgggcggccg
ggcgcccagcggctggcggtgacctccggcggcacgatccccgaccgcggcctgttcgcc
gtcatgaccccgggcgacgaggggcggcccgggtcgcgggtcggcgagctggacgaggag
atggtgtacgagtcgcgggtgggcgacacgttcctcctgggcacgtccgcgtggcgggtc
gaggacatcacccacgaccgggtgatcgtcacgccagccccgggcgagcccgcgcggatg
ccgttctggaagggcgactccccgggtcggccgctggaactgggccgcgcgcagggcgcg
ttcctgcgggagctggccgccgccgagcccgcggcggcccgggagcgggcggccgcggcc
gggctcgacgcgtgggcgaccgacaacctgctggcgtacctggccgagcagcgggaggcc
acccggcacatccccgacgaccgcacgctgctggtcgagcggttccgcgacgagctgggc
gactggcggctggtggtgcactcgccgttcggcgcgcaggtcaacgcgccgtgggcgctg
gccatcggcgcccggctgcgcgagtcgcgcggggtcgatgcgcagatcgcgcactccgac
gacggcatcgtcgtccggctgcccgacacggtcgacgactccgggcgggagctggtcgcg
ggcgccgaggacgtgatcctcgcgcccgaggaggtcgagcaggtcatcgtcgccgaggtg
ggcggctcggcgctgttcgcctcccggttccgcgagtgcgcggcccgctcgctgctcctg
ccccggcgggacccgcgccgtcggaccccgctgtggcagcagcgacagcgatcggcgcag
ctgttgtcggtcgcctcgaagtacgagcagttcccggtcgtgctggaggcgatgcgcgag
tgcctgcaggacgtgtacgacgtcgcgggcctgcgtgagctgatgaccgacgtgcgggcg
cggcgcgtgcgggtggtggaggtccagacgcagtcggcgtcgccgttcgcccgcagtctg
ctgttcggctacatcgggatgttcctctacggcgaggacgtccccctggccgaacgtcgg
gcggccgcgttgtccctggacagcgcgctgctggccgagttgttggggtcagaggccatc
cgggagctgctcgacccggagatcgtggccgaggtcgagcgctcgctgcagcggcttacg
ccggagcggcacgcccggcacgccgaggacgccgccgacctgctgcgcttcctgggcgac
ctcagcgaggccgaggcggccgagcggggcgtgcggccggagtggctggccgagctgcag
caggcccggcgcgcgctgcgggtgcgcatcggcggcgaggagcggtacatcgccatcgag
gacgcgggccgggttcgggacgcgctgggcaccgcgttgccggtcggtgtgccggaggtg
ttcaccgagccggtccctgacccgctcggcgacctgctgtcgcgttatgcccgcacgcac
gggccgttcccggcggcggaggccgccgagcggttcgggctgggggtgtcggtggtgacg
ggcgtgctggaacgactggcgggctccggcaggctggtgcgcggcgaactgcggcccggc
ggcacgcacaccgagttctgcgacgccgacgtgctgcgacggctgcggcgcgcgtcgctg
gcccggctgcgcgccgaggtcgagccggtcgaaccggccgcgctggggcggttcctgccg
gggtggcacggcgtgggccgcaagcagcgcgggctgccgaccgctgacgatgtgctgtcg
gtgatcgagcagttggcgggggccccgctgcccgcgagcgcgttggaatcgctggtgctg
cccgcccggttgccgggctacagcccggccctcctcgacgagttgaccgcgacgggcgag
gtgacgtggtgcggcacggggtcgcttgcgggcggcgacggctggctcgcgctggccccg
tccgacgtcgccgacctgctgctgcccgatgtcgaggaggcggtgcccgacaccccgctg
cacggcgcggtgctgtccgctttggacggtggcgcgctgttcttccgccagttggccgac
cgtgccagtgccgttctgctcgacgggggcgccgaggcgcccggcgacgccgacgtgatc
gccgccctgtgggacctcgtgtggggcggtctggtcaccaacgacaccttggcgcccctg
cgggcggtgctgtccggcggcggcgcccaccggccgcgtcggtcggcgccccgcggccgc
tacgcccggatgcgcgcggcgcgcccgagcatgccgagccggacgggcccgccgacggtg
gcgggcaggtggtcgctggtccccgaccgcgagacggagaccacccggcgggcgcacgcc
cgggccgaggcgttcctggaacgccacggcgtgctgaccaggggcgcgctggacaccgag
cgcgtgacgggcgggttcagcggggtctacaaggtactgcgggcgatggaggagtccggg
cagatcatccgcggctacgtcgtggaggggctgggcgcggcgcagttcgccagtcggggc
gcggtggaccggctgcgcgcgttgtcccgctcggatgacgcggtggtcgacgcggaagcg
gtggtcctggccgcggccgacccggcccagccgtacggggccgccctgccgtggccggac
ccggtcggcgctggtggccaccgtccggcccgcaaggcgggcgccttggcggtgctcgtg
gacggcacgcccgcactgtacgtggagcggggtgggcggacgctgctgtcgttcaccgag
gccgaggcaactctccgctccgccgcggagggcctgtcccgggcggtgcgcgacggctgg
ttaggcgagctgtcggtccagcgcgccgatggcgaggtggcgctcacgtcgtcgctggcg
gatgtcttacgcgaggcgggcttccgcgcgacgccgaagggcttacgcctgcgcggctag

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