Actinokineospora sp. UTMC 2448: Actkin_02354
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Entry
Actkin_02354 CDS
T08397
Symbol
lcfB_1
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
actu
Actinokineospora sp. UTMC 2448
Pathway
actu00061
Fatty acid biosynthesis
actu00071
Fatty acid degradation
actu01100
Metabolic pathways
actu01212
Fatty acid metabolism
actu02024
Quorum sensing
actu04146
Peroxisome
Module
actu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
actu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Actkin_02354 (lcfB_1)
00071 Fatty acid degradation
Actkin_02354 (lcfB_1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Actkin_02354 (lcfB_1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
Actkin_02354 (lcfB_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
actu01004
]
Actkin_02354 (lcfB_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
actu04147
]
Actkin_02354 (lcfB_1)
Enzymes [BR:
actu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Actkin_02354 (lcfB_1)
Lipid biosynthesis proteins [BR:
actu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Actkin_02354 (lcfB_1)
Exosome [BR:
actu04147
]
Exosomal proteins
Exosomal proteins of breast milk
Actkin_02354 (lcfB_1)
Exosomal proteins of breast cancer cells
Actkin_02354 (lcfB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Prot_ATP_ID_OB_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
UVS78620
LinkDB
All DBs
Position
2508732..2510225
Genome browser
AA seq
497 aa
AA seq
DB search
MPNTAEALWRHASATPDRVALLGGGDVWTYRELRDRVAAVAGHLREVGVRPGDRVLLVAP
SVPEFVGAYYGVHAAGGIAVTANTMSTGPELEHIGADAGVVLVLSWDGVGQAPGRAAEAL
GVPCLPLVPGLLGLDRGDAVEAPHATPADTTAAILYTSGTTGRPKGAQLTHGNLEASGAI
LRASHGITAADRGATALPLFHVYGQACVMNVAMQAGASLALLARFDPATMLSLLRETEPT
FLAGVPTMWNALLHAAGAGGAGEFAGLRHASSGGASLPAEVMRAFEERFGCAILEAYGLT
ETCGAATYQDPGRPYKPGHVGIPLPGCAIAIRDEGGGDLPAGEVGEVHISGPVVMKGYWN
RPDATAEVLRDGWLRTGDLGTLDPDGDLRIVDRKKDMVIRGGYNVYPSEVEEVLYQHPDI
VEAAVVSVPDDHYGEEVAAVITLRPGAELATEDLRAWAKERLSAYKVPHLVAVVDQLPRG
PTGKILKRAIDRTVFSR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgccgaacacagccgaagccctctggcggcacgcgagcgccacacccgaccgcgtcgcg
ctcctcgggggcggcgacgtgtggacctaccgggagctgcgcgaccgcgtcgccgccgtc
gcgggccacctgcgcgaggtcggcgtgcggccgggcgatcgcgtgctgctggtggcaccg
tccgtgcccgagttcgtcggcgcgtactacggcgtccacgccgcgggcggcatcgcggtc
acggcgaacacgatgtcgaccgggcccgagttggagcacatcggcgcggacgcgggcgtg
gtgctcgtcctgagctgggacggggtcgggcaggcgccggggagggcggccgaggcgctg
ggcgtcccgtgcctgccgctcgtccccggcctgctcggcctcgaccgcggcgacgcggtc
gaggcaccgcacgcgaccccggcggacaccacggccgcgatcctctacacctcgggcacg
accggacgtccgaagggcgcccagctgacccacggcaacctggaggcgtccggcgcgatc
ctgcgcgcgagccacggcatcaccgccgccgaccggggcgcgaccgcgctgccgctgttc
cacgtgtacgggcaggcgtgcgtcatgaacgtcgcgatgcaggccggggcgagcctggcg
ctgctggcgcggttcgaccccgcgaccatgctgtcgctgctgcgggagacggaaccgacc
ttcctcgcgggggtgccgaccatgtggaacgcgctcctgcacgccgcgggggcgggcggg
gccggggagttcgccggactgcgccacgcctcgtccggcggggcctccctgcccgcggag
gtcatgcgcgccttcgaggagcggttcgggtgcgcgatcctggaggcgtacgggctgacg
gagacgtgcggggcggcgacctatcaggaccccggcaggccctacaagcctggacatgtc
ggcattccgttgccgggctgtgccatcgccatccgggacgagggcgggggcgacctcccg
gcaggcgaggtcggcgaggtccacatcagcgggccggtcgtgatgaaggggtactggaac
cgcccggacgccaccgccgaggtcctgcgcgacggctggctccgcacgggcgacctcggg
accctggaccccgacggcgacctgcgcatcgtcgaccgcaagaaggacatggtgatccgg
ggcggctacaacgtctatccgagcgaggtcgaggaggtgctgtaccagcatccggacatc
gtcgaggccgcggtggtcagcgtgccggacgaccactacggcgaggaggtggccgcggtc
atcaccctgcggccgggcgccgaactcgccaccgaggacctgcgcgcgtgggcgaaggaa
cggctgtcggcctacaaggtcccgcacctggtggccgtggtcgaccaactccccaggggg
ccgacgggcaagatcctcaaacgggcgatcgaccggaccgtgttcagccgctga
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