Actinokineospora sp. UTMC 2448: Actkin_03004
Help
Entry
Actkin_03004 CDS
T08397
Name
(GenBank) two component system sensor kinase SsrB
Organism
actu
Actinokineospora sp. UTMC 2448
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_16
GerE
Sigma70_r4_2
HTH_23
AAA_22
NACHT
AAA_5
HTH_24
ATPase_2
HTH_29
TsaE
HTH_28
Zeta_toxin
TPR_2
TPR_10
Motif
Other DBs
NCBI-ProteinID:
UVS79257
LinkDB
All DBs
Position
complement(3279409..3282210)
Genome browser
AA seq
933 aa
AA seq
DB search
MGQGHATPLSVRSGPAPMIGRDAELAALLAAVRHAPSVVFVEGQAGVGKTRLVSEFAAAC
RDRRVVMGTCHPLPEAFPYGVLLDCLSQCRDGLDDPGPVTGALRAHLPELADRLPPAPPA
LGDPDAERHRMFRAVRDLLRALGPTVLVLDDLHWADEETRQVLRFVMASPPPGLSIVATY
RREDLPAGTPLGRVVHIPHGRHLVLRPFDAADVRAMIDAIVGAEVTSERFAEAVLRETAG
LPFVVEETVRALRDPVRDVRADGDLAQRLLDGIDVPVLVADAVRERIRALPDAARSVVEA
AAVLGVPETAEVIGAVAGEAEHLVDSGVLVEETPNRYGFRHGVARRVVRASLPGPRRREL
HERAVAVLSGLDPAPLARLAAHAKAAGMTGEWLRYCELAAEAAEEAKDAATAVDLLSAVL
ADPGLSVEDTNRLATRLCGYALTGLPGGVVTARVEGLLADPRLAPDVRGEVHLWFGLLLQ
RETGEIVRGAEELAQAVDLLADQPERTARGLAAMAGPYLGTASVAENRAALGRVERIVDH
LPTPALRVALLATTLGGRLVLGDPSAWERVAQLPSPADVRDPDEVHHLARAHCNLADACS
WIGHYGRAREFLRTGIALAERVAADYVVGTAEATAVRLDWLCGRWAGLEQRIDRLVATYG
NLLLTTDLHLTRGWLAAARGEWVRAEEAFQAAGAHQVFPVGVSAAGGMAGMLLSRGKAAA
AEEHVERGVAVLRSKGAWVWSGDILPQAVDCYLAVGRVDAARQVVAETAAGLSGVDAPLA
RAALTACRARLAASEDRDDAERLYREAIDLHRELGLSYRATQLAEQAEGAARTDAAVLDA
LARSYDALGATVDAARCRHRIRSTGATTPSRRGRRGYGSELSPREQDVARLLAGGHTNRE
IAQALFLSRRTVEEYVVKVRRKLNASSRHDVHF
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgggccaaggtcacgcgactcccctctcggtcagatccggcccggcgccgatgatcggc
cgggacgcggagctggccgccctgctcgccgcggtccggcacgcgccgtcggtggtgttc
gtcgagggtcaggccggtgtgggcaagaccaggttggtcagcgagttcgccgccgcctgc
cgggacaggcgggtggtcatgggcacgtgccatccgctgcccgaggcgttcccgtacggc
gtgctcctcgactgcctcagccagtgccgcgacggcctggacgacccgggcccggtgacc
ggggcgctgcgggcccacctgcccgaactcgccgaccgcctgccgccagcgccgcccgcc
ctcggcgatcccgacgccgagcggcaccggatgttccgggccgtgcgcgacctgctccgc
gcgctggggcccaccgtgctcgtgctggacgacctgcactgggcggacgaggagacccgc
caggtgctgcggttcgtcatggcgagcccgccgccgggcctgtcgatcgtggcgacctac
cgccgcgaggacctgcccgccgggacgccgctcggacgcgtcgtgcacatcccgcacggg
cgccacctggtcctacgccccttcgacgccgccgacgtgcgggccatgatcgacgcgatc
gtgggagccgaggtgacctcggagaggttcgccgaggccgtcctgcgcgagacggccggg
ctcccgttcgtggtcgaggaaaccgtgcgggcgctgcgcgaccccgtgcgggacgtgcgg
gccgacggcgacctcgcccagcggctcctggacggcatcgacgtgcccgtcctggtcgcg
gacgcggtccgggagcggatccgggccctgccggacgccgcgcggtccgtcgtcgaggcc
gccgccgtgctgggcgtgccggagacggccgaggtcatcggcgcggtggcgggcgaggcg
gagcacctggtcgacagcggtgtgctcgtggaggagacgccgaacaggtacggcttccgg
cacggcgtcgccaggcgcgtggtgcgcgcgtcgctgcccggccctcggcggcgggaactg
cacgagcgcgccgtcgcggtgctgtccggcctcgaccccgcgccgctcgcgcgccttgcc
gcccatgccaaggccgcgggcatgaccggcgagtggctgcggtactgcgaactcgccgcc
gaggccgccgaggaggccaaggacgcggccaccgcggtcgacctgctctcagcggtgctg
gccgatcccgggctcagcgtcgaggacaccaaccggctggccaccaggctgtgcggctac
gcgctgacgggactgcccggcggggtggtgaccgcgcgagtcgaagggctgctggcggac
ccccggctggccccggacgtgcggggcgaggtgcacctgtggttcgggctgctgctgcag
cgcgagaccggggagatcgtccgcggcgccgaggaactggcccaggccgtcgacctgctc
gccgaccagccggaacggaccgcgcgggggctggcggcgatggccgggccctacctgggg
accgcgtcggtcgccgagaaccgggccgcgctcgggcgggtggagcggatcgtcgaccac
ctgcccaccccggccctgcgcgtcgcgctgctggccacgacgctgggcgggcggctcgtc
ctcggcgacccgagcgcctgggagcgcgtcgcccaactgccgtcgcctgccgacgtgcgc
gatcccgacgaggtccaccacctggccagggcgcactgcaacctggcggacgcgtgctcg
tggatcgggcactacggccgggcgcgggagttcctgcgcaccgggatcgccctggccgag
cgggtcgccgccgactacgtcgtcggcacggctgaggccacggcggtgcggctcgactgg
ctctgcgggcggtgggcggggctggagcagcggatcgaccgcctggtcgccacctacggg
aacctgctgctgaccaccgacctgcacctcacgcggggctggctggcggcggcgcgcggc
gagtgggtgcgggccgaggaggcgttccaggcggcgggcgcgcaccaggtgttcccggtg
ggcgtctcggcggccggggggatggcgggcatgctgctcagccggggcaaggccgccgcg
gcggaggagcacgtcgagcgcggtgtcgcggtgctgcggagcaagggcgcgtgggtgtgg
tcgggcgacatcctgccccaggccgtcgactgctatctggcggtgggccgcgtcgacgcc
gcgcggcaggtcgtcgcggagacggccgcggggctgagcggtgtcgacgccccgctggcc
cgggcggcgctgaccgcctgccgcgcgcggctggccgcgtcagaggaccgcgacgacgcc
gaacggctctaccgggaggctatcgacctgcaccgggagctggggctgtcctatcgcgcc
acccagctcgccgagcaggccgagggcgcggcccggaccgacgccgcggtgctcgacgcg
ctggcccggtcctacgacgccctgggcgcgacggtcgacgccgcccgctgccgccaccgc
atccgcagcaccggggcgacgaccccctcgcggcgcggtcggcgcggctacggcagcgaa
ctgtccccccgggagcaggacgtggcgcgcctcctggcgggtgggcacaccaaccgggag
atcgcccaggccctgttcctctcccgccgcaccgtcgaggagtacgtcgtcaaggtccgg
cgcaagctgaacgcctcctcgcgccacgatgtccacttctga
DBGET
integrated database retrieval system
