Actinokineospora sp. UTMC 2448: Actkin_03536
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Entry
Actkin_03536 CDS
T08397
Name
(GenBank) DNA topoisomerase type I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
actu
Actinokineospora sp. UTMC 2448
Brite
KEGG Orthology (KO) [BR:
actu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actu03032
]
Actkin_03536
03400 DNA repair and recombination proteins [BR:
actu03400
]
Actkin_03536
Enzymes [BR:
actu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Actkin_03536
DNA replication proteins [BR:
actu03032
]
Prokaryotic type
DNA Topoisomerases
Actkin_03536
DNA repair and recombination proteins [BR:
actu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Actkin_03536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
UVS79786
LinkDB
All DBs
Position
complement(3901657..3902688)
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AA seq
343 aa
AA seq
DB search
MTGAQAGYTAGVRRSDPSKPGITRRRQGRGWRFLDPTGRPLSPEETERVRSLAIPPAWRD
VWICPHPTGHIQAVGTDDAGRRQYLYHEQWRKQRDEAKHERVQELAVILPRFRAAVHDDL
SSDGLTCRRVLGGALRMLDRGVFRTGGEEYAEENGSHGVATLLREHVVLRRGLLVFDYPA
KSGLQRAVSLNDPELSALVRSLKRVRTGSDRLLAYRERRGQWRELRSGEINDRFKELTAA
DYTVKDLRTWHATVVAAIGFARAEAATSQRARKRVDAAVMDMVADDLGNTRAIARKSYVD
ARVVEAFAEGRTIRATLDRTGDDLTDEATRQRIERAVLKLLDS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggggcccaggctgggtacaccgcaggcgtgcggcgcagcgatccgtccaaaccc
gggatcaccagacggcggcagggccggggctggcgcttcctcgatcccaccgggcgtccg
ttgagcccggaggagaccgaacgcgtccgctcgctcgcgatcccgcccgcctggcgggac
gtgtggatctgcccgcacccgaccggccacatccaggccgtgggcaccgacgacgcgggc
aggcggcagtacctctaccacgagcagtggcgcaagcagcgcgacgaggccaagcacgag
cgcgtccaggagctggccgtgatcctgccccggttccgcgccgccgtccacgacgacctg
tcctcggacggcctgacctgccgccgggtgctgggcggggcgctgcgcatgctcgaccgg
ggcgtcttccgcaccggcggggaggagtacgccgaggagaacggcagccacggcgtcgcc
acgctgctgcgtgagcacgtggtgctccggcgcggcctcctggtgttcgactacccggcc
aagagcggcctccagcgcgccgtgtccctgaacgaccctgagctgtccgctctcgtgcgc
tcgctgaagcgcgtccgcaccggaagcgaccgcctgctggcctaccgcgagcgccgaggg
cagtggcgcgagctgcgctcgggagagatcaacgaccgcttcaaggagctgaccgccgcg
gactacacggtgaaggacctgcgcacctggcacgccacggtggtggccgccatcggcttc
gcgcgggccgaggcggcgacgtcgcagcgcgcccgcaagcgggtcgacgccgccgtcatg
gacatggtcgccgacgacctgggcaacaccagggccatcgcccgcaagtcctatgtggat
gcccgggtggtcgaggcgttcgccgaggggcgcaccatccgggcgaccctggaccgcacc
ggcgacgacctgaccgacgaggccacgcgccagcggatcgagcgggcggtcctgaagctg
ctggacagctga
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