Actinokineospora sp. UTMC 2448: Actkin_03579
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Entry
Actkin_03579 CDS
T08397
Symbol
clpC_4
Name
(GenBank) Negative regulator of genetic competence ClpC/MecB
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
actu
Actinokineospora sp. UTMC 2448
Brite
KEGG Orthology (KO) [BR:
actu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
actu03110
]
Actkin_03579 (clpC_4)
Chaperones and folding catalysts [BR:
actu03110
]
Heat shock proteins
HSP100
Actkin_03579 (clpC_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
NBD_SMAX1
ATPase_2
UVR
bpMoxR
TniB
AAA_14
NACHT
AAA_33
nSTAND3
AAA_7
DUF815
TsaE
AAA_18
RsgA_GTPase
DNA_pol3_delta2
DUF87
AAA_25
nSTAND6
Zeta_toxin
AAA_3
ResIII
T2SSE
Halo_GVPC
Torsin
Motif
Other DBs
NCBI-ProteinID:
UVS79829
LinkDB
All DBs
Position
3957557..3960043
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AA seq
828 aa
AA seq
DB search
MTGVFGPGGPGRSFDEFLAQFFGAGGGRGSYSVDITRLMSDQARDLVSDAVNQTAGWGRT
DLDTEQLLWAATRQQATRVLIERAGADPDELASRIEERSQVGEPRQGPVRLTPAAKRALL
DAHQISRGLGSSYIGPEHLLLALATNPESGAGKMLSDQRVTPETLAGRGREERSRPEQAT
TLEQFGRDLTAMAREGGLDPVIGRDEEIEQTVEVLSRRTKNNPVLIGEAGVGKTAVVEGL
AQRIAEGDVPDTLARRRVVQLDLAAMVAGTRYRGDFEERMTNLLAEIRAKRDELIVFIDE
LHTMVGAGAAEGAMGAGNMLKPALSRGELHIVGATTLDEYRRDIESDPALERRFQPILVP
EPSVEDTVAILHGLRDRYEAHHQVRFTDEALDAAATLSDRYVTDRFLPDKAIDLLDQAGA
RVRLRSGRGPAKVRDLQAQLDQVTRDRDQAVSEEDYERAARLRDAIAALRADIEATRSGG
RPTDVPEVVTEDIAQVVSRLTGIPVSQLTQAERERLLKLEEHLHGRVVGQDEAVQAVAEA
VRRSRTGLAEPDRPAGSFLFLGPTGVGKTELARTLAEALFGDETHMIRLDMSEYGERHTV
SRLVGAPPGYVGYEEAGQLTEAVRRRPYSVVLLDEIEKAHPEVFNVLLQVLDDGRLTDGR
GRTVNFTNTVLIMTSNLGSELITASTQGALGFAPATERDTDQPLRERIMRRLRESFRPEF
LNRIDEIIVFRRLEEDQLHRITELMLEQTRRRAHAQDIRLEISPDAVAWLARRGHQPEFG
ARPLRRTIQREVDNRLSRMLLDGTLSPGAHVRVDVADDNLTVTSLQSA
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtgtgttcgggccaggtggtcctgggcggagcttcgacgagttcctggcgcag
ttcttcggggcgggcggcggccgcgggtcgtattcggtggacatcacccggttgatgagt
gatcaggcgcgtgacctcgtctccgacgcggtcaaccagaccgcggggtgggggcgcacg
gacctcgacaccgagcagttgctctgggccgccacccggcagcaggccacccgggtgctg
atcgagcgcgcgggcgccgaccccgacgagctcgccagccggatcgaggagcggtcccag
gtgggtgagccgcggcagggtcccgtgcggctcacgcccgcggccaagcgggcgttgttg
gacgcgcaccagatctcccgcggcctcggctcgtcctacatcgggcctgagcacctgctg
ctcgcgctggccaccaacccggagtcgggcgcgggcaagatgctctccgaccagcgagtc
accccggagacgctggccgggcgggggcgcgaggagcggagcaggccggagcaggccacc
acgctggagcagttcggccgggacctgaccgcgatggcccgcgagggcgggctggacccg
gtgatcggccgcgacgaggagatcgagcagaccgtcgaggtgctttcccgccgcacgaag
aacaaccccgtgctcatcggcgaggcgggtgtgggcaagacggccgtggtggaggggctg
gcccagcgcatcgccgagggcgacgtgcccgacacgctggcccgccgccgggtcgtgcag
ctcgacctggccgccatggtggcgggcacccgctaccgcggcgacttcgaggagcggatg
accaacctgctggccgagatcagggccaagcgcgacgagctgatcgtcttcatcgacgag
ctgcacaccatggtcggcgcgggcgcggcggagggcgcgatgggcgcgggcaacatgctc
aagcccgcgctgtcccgcggcgagctgcacatcgtcggcgcgacgacgctggacgagtac
cgccgcgacatcgagtccgacccggccctggagcgccggttccagcccatcctggtgccc
gagccgagcgtcgaggacaccgtcgcgatcctgcacggcctgcgcgaccgctacgaggcc
caccaccaggtccggttcaccgacgaggcgctggacgccgccgcgacgctgtccgaccgg
tacgtcaccgaccggttcctgccggacaaggccatcgacctgctcgaccaggcgggcgcg
cgggtccggctgcgctccggccggggcccggccaaggtgcgcgacctgcaggcgcagctg
gaccaggtcacccgcgaccgcgaccaggccgtcagcgaggaggactacgagcgcgccgcg
cggctgcgcgacgccatcgccgcgctgcgcgccgacatcgaggccacccgctccggcggc
cgcccgaccgacgtgcccgaggtggtcaccgaggacatcgcgcaggtcgtgtcccggctg
accggcatcccggtcagccagctcacccaggccgagcgcgagcggctgctgaagctggag
gagcacctgcacggccgggtcgtcgggcaggacgaggcggtgcaggccgtggccgaggcg
gtgcgccgctcgcgcaccgggctggccgagcccgaccggccagcgggcagcttcctgttc
ctcggcccgaccggcgtcgggaagaccgagctggcgcgcacgctggccgaggccctcttc
ggcgacgagacccacatgatccgcctcgacatgagcgagtacggcgagcggcacacggtc
agcaggctggtcggcgccccgcccggctacgtgggctacgaggaggccgggcagctgacc
gaggcggtccgccgccgcccctactcggtggtcctgctcgacgagatcgagaaggcccac
cccgaggtgttcaacgtcctcctgcaggtcctcgacgacggcaggctcaccgacggccgc
ggccgcacggtcaacttcaccaacacggtgctgatcatgaccagcaacctgggctcggag
ctgatcacggcgagcacccagggcgcgctcggcttcgcccccgcgaccgagcgcgacacc
gaccagccgctgcgggagcgcatcatgcggcggctgcgggagagcttccggccggagttc
ctcaaccgcatcgacgagatcatcgtcttccgcaggctggaggaggaccagctgcaccgc
atcaccgagctcatgctggagcagaccaggcgccgcgcccacgcccaggacatccggctg
gagatcagcccggacgcggtcgcctggctggccaggcggggccaccagcccgagttcggc
gcccggccgctgcggcgcaccatccagcgcgaggtcgacaaccggctctcccggatgctg
ctcgacggcacgctcagccccggcgcgcacgtgcgcgtcgatgtcgccgacgacaatctc
accgtgacgagcctgcagtccgcctga
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