Actinokineospora sp. UTMC 2448: Actkin_03819
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Entry
Actkin_03819 CDS
T08397
Symbol
sigB_1
Name
(GenBank) Sigma-37
KO
K03090
RNA polymerase sigma-B factor
Organism
actu
Actinokineospora sp. UTMC 2448
Brite
KEGG Orthology (KO) [BR:
actu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
actu03021
]
Actkin_03819 (sigB_1)
Transcription machinery [BR:
actu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Actkin_03819 (sigB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
DUF7343
MarR
HTH_24
HTH_3
HTH_Crp_2
HTH_31
HTH_AsnC-type
KORA
HTH_AraC
GerE
TPR_7
Motif
Other DBs
NCBI-ProteinID:
UVS80069
LinkDB
All DBs
Position
4226948..4227739
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AA seq
263 aa
AA seq
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MTQPHLTTHARRETGDYADLAPLFDELAALSPDDPRRADLRTRLVTGHLPVAQHIAQRFA
NRGEPQDDLLQVATVGLINAVDRFDPARGTDFLSFAIPTVMGEVRRHFRDTCWSLRVPRR
LKELHLAVSTASAELAQTLGRAPTPSEIAAHLKEPIEDVYQGLEAAGGYRSQSLDEVLGP
DEDSASVGDRIGFEDRALAEVDQQETLQPLLAELPERERRILILRFYGNMTQTQIAEKVG
LSQMHVSRLLSRTLRRLRERIGD
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
gtgacccagccccacctgacgacgcacgcccggcgcgagacaggtgactacgcggacctc
gcccccctgttcgacgagctcgccgcgctgtcgcccgacgacccgcgccgcgccgacctg
cgcacccggctggtcaccggccacctcccggtcgcccagcacatcgcccagcgcttcgcc
aaccgcggcgagccccaggacgacctgctccaggtggcgaccgtcggcctgatcaacgcc
gtcgaccgcttcgaccccgcccgcggcacggacttcctgtccttcgcgatccccacggtg
atgggcgaggtccgccgccacttccgcgacacctgctggtcgctgcgcgtgccccggcgg
ctcaaggagctgcacctcgcggtcagcacggccagcgccgaactcgcccagaccctgggc
cgcgcgccgacgcccagcgagatcgccgcccacctcaaggagccgatcgaggacgtctac
cagggactggaggccgcgggcggctaccggtcgcagtcgctggacgaggtgctgggcccg
gacgaggactcggcgtcggtgggcgaccgcatcggcttcgaggaccgcgcgctggccgag
gtggaccagcaggagaccctgcagccgctgctggccgagcttcccgagcgcgagcgccgg
atcctgatcctgcggttctacgggaacatgacccagacgcagatcgccgagaaggtcggg
ctctcccagatgcacgtctcccgcctgctgagccggacgctgcggcggctgcgcgagcgg
atcggcgactga
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