Actinokineospora sp. UTMC 2448: Actkin_04076
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Entry
Actkin_04076 CDS
T08397
Symbol
polA_3
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
actu
Actinokineospora sp. UTMC 2448
Pathway
actu03030
DNA replication
actu03410
Base excision repair
actu03420
Nucleotide excision repair
actu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
actu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Actkin_04076 (polA_3)
03410 Base excision repair
Actkin_04076 (polA_3)
03420 Nucleotide excision repair
Actkin_04076 (polA_3)
03440 Homologous recombination
Actkin_04076 (polA_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actu03032
]
Actkin_04076 (polA_3)
03400 DNA repair and recombination proteins [BR:
actu03400
]
Actkin_04076 (polA_3)
Enzymes [BR:
actu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Actkin_04076 (polA_3)
DNA replication proteins [BR:
actu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Actkin_04076 (polA_3)
DNA repair and recombination proteins [BR:
actu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Actkin_04076 (polA_3)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Actkin_04076 (polA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
TraI_hel_assoc_N
DUF7251
bPH_1
Motif
Other DBs
NCBI-ProteinID:
UVS80326
LinkDB
All DBs
Position
4486846..4489581
Genome browser
AA seq
911 aa
AA seq
DB search
MPAKTVPAKSETPAPTAVRRLLLIDGHSMAYRAFFALPKENFSTGTGQHTNAVYGFTSML
INLLRDEAPTHLAVCFDLSRQTFRSEAFADYKANRSASPDEFKGQVSLIQEVLTALQIPM
LSKENYEADDCIATLTTLATAQGYHVAICTGDRDALQLVTDQVTVLYPVKGVSELARFTP
ELVLEKYGVSPGQYPDFAALRGDPSDNLPKIPGVGEKTIAKWMQQFGSLDAIIDRVDEVK
GKVGDALRANLSSVVLNRQLTELVRDVPLGVEPDELAVRPWDRDAVHRLFDELEFRVLRD
RLFETLSTAEPEAEEGFEVSGGALAPGALPGWLAEHAGPGTRVGLSFRDQQVGVSGQAVE
LRSIALSGVDGAGAYVDVTALDEGDETALRAWLSDPGRPKLAHDVKRSLHALRHRGWELH
GLVTDTALAAYLVRPGQRTFSLDDLVLRYLQRELRVEQNDGEQQLSLLDEEGDDERRLAA
GEIVRARAIAELADALDAALAELGQDKLLAEIELPLLRVLAELEADGIAVDVARLQELES
HFGARVRDAERAAFDVIGKEINLGSPKQLQVVLFDELQMPKTKKTKTGYTTDADALTTLY
EQTEHPFLRHLLEHRDAMRMKITVEGLLKSVGDDDRIHTTFNQTIAATGRLSSTEPNLQN
IPIRTAEGRMIRDAFIVGPGFGELMSADYSQIEMRIMAHLSEDEGLISAFRSGHDFHAAT
AARVFSAEPSEVTGEQRAKIKAMNYGLAYGLSAFGLSQQLRISTEEARGLMEEYFATFGG
IRDYLAEVVARARKDGYTETIFGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADIIK
VAMLRVQKALRKAGTATRMLLQVHDELVFEVAPGERESAEALVRAEMAGAFDLRVPLDVS
VGYGRSWHAAH
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgcgaagaccgtgcccgccaagtccgagacgcccgccccgacggccgtgcgccgc
ctgctgctcatcgacggccactcgatggcgtaccgggcgttcttcgcgctgcccaaggag
aacttctccaccggcaccggccagcacaccaacgcggtgtacggcttcacctccatgctc
atcaatctgctgcgcgacgaggcccccacgcatctcgcggtgtgcttcgacctgtcgcgg
cagacgttccgctcggaggcgttcgccgactacaaggccaaccgcagcgcatcgcccgac
gagttcaagggccaggtcagcctcatccaggaggtgctgaccgccctgcagatcccgatg
ctgtccaaggagaactacgaggcggacgactgcatcgccacgctgacgacgctggccacc
gcgcagggctaccacgtggcgatctgtaccggcgaccgggacgcgctgcagctggtcacc
gaccaggtgacggtgctctacccggtcaagggcgtctccgagctggcccggttcaccccc
gagctggtgctggagaagtacggcgtcagccccggccagtaccccgacttcgccgcgctg
cgcggcgacccgagcgacaacctgccgaagatccccggcgtcggcgagaagacgatcgcc
aagtggatgcagcagttcggctcgctggacgcgatcatcgaccgggtcgacgaggtcaag
ggcaaggtcggcgacgcgctgcgggcgaacctgtccagcgtggtgctcaaccgccagctc
accgagctggtgcgcgacgtgccgctgggcgtcgagccggacgagctggccgtgcggccg
tgggaccgcgacgccgtgcaccggctgttcgacgagctggagttccgggtcctgcgcgac
cggctgttcgagacgctgtcgaccgccgagcccgaggccgaggagggcttcgaggtcagc
ggcggcgcgctggcccccggcgcgctgccgggctggctggccgagcacgccgggccgggc
acccgcgtcggcctgtcgttccgcgaccagcaggtcggcgtgtccgggcaggccgtcgag
ctgcggtcgatcgcgctgtcgggggtcgacggcgcgggcgcgtacgtcgacgtcacggcg
ctggacgagggcgacgagacggcgctgcgcgcgtggctgtccgacccggggcggccgaag
ctggcccacgacgtcaagcgctcgctgcacgcgctgcgccaccgcggctgggagctgcac
ggcctggtcaccgacaccgcgctggcggcgtacctggtgcggccgggccagcgcacgttc
agcctcgacgacctcgtgctgcggtacctgcagcgcgagctgcgcgtggagcagaacgac
ggcgagcagcagctgtccctgctcgacgaggagggcgacgacgagcgcaggctcgccgcg
ggcgagatcgtgcgcgcgcgggccatcgccgagctggccgacgcgctcgacgccgcgctc
gccgagctgggccaggacaagctgctcgccgagatcgagctgccgctgctgcgggtgctg
gccgagctggaggccgacggcatcgccgtcgacgtggcccggctgcaggagctggagtcg
cacttcggcgcccgggtgcgcgacgcggagcgggcggcgttcgacgtcatcggcaaggag
atcaacctcggctcgcccaagcagctgcaggtcgtgctgttcgacgagctgcagatgccc
aagacgaagaagaccaagaccggctacaccaccgacgccgacgcgctgaccacgctctac
gagcagaccgagcacccgttcctgcgccacctgctcgagcaccgcgacgcgatgcggatg
aagatcaccgtcgagggcctgctcaagtccgtcggcgacgacgaccgcatccacaccacg
ttcaaccagacgatcgcggcgaccgggcggctgtcgtccaccgagccgaacctgcagaac
atccccatccgcacggccgagggccggatgatccgcgacgcgttcatcgtcggtcccggc
ttcggcgagctgatgtcggccgactacagccagatcgagatgcggatcatggcgcacctg
tcggaggacgaagggctcatctcggcgttccgctccggccacgacttccacgccgccacc
gcggcgcgggtgttctccgccgagccgtccgaggtcaccggggagcagcgggccaagatc
aaggccatgaactacggcctggcctacgggctctccgcgttcgggctgtcgcagcagctg
cgcatctccaccgaggaggcgcgcgggctgatggaggagtacttcgccaccttcggcggc
atccgcgactacctggccgaggtcgtcgcccgcgcccgcaaggacggctacaccgagacg
atcttcggccgcaggcgctacctgccggacctgaccagcgacaaccgccagcgccgggag
atggccgagcggatggcgctcaacgccccgatccagggcagcgccgccgacatcatcaag
gtcgccatgctgcgcgtgcagaaggcgctgcgcaaggccgggaccgcgacccggatgctg
ctgcaggtgcacgacgagctggtgttcgaggtggcccccggcgagcgggagtcggcggag
gcgctggtgcgcgcggagatggcgggcgcgttcgacctgcgggtcccgctggacgtgtcg
gtcggctacggccgctcgtggcacgcggcccactag
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