Actinokineospora sp. UTMC 2448: Actkin_04097
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Entry
Actkin_04097 CDS
T08397
Symbol
rnz
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
actu
Actinokineospora sp. UTMC 2448
Brite
KEGG Orthology (KO) [BR:
actu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
actu03016
]
Actkin_04097 (rnz)
Enzymes [BR:
actu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Actkin_04097 (rnz)
Transfer RNA biogenesis [BR:
actu03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Actkin_04097 (rnz)
Prokaryotic type
Actkin_04097 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
UVS80347
LinkDB
All DBs
Position
complement(4507775..4508692)
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AA seq
305 aa
AA seq
DB search
MSPRELVVLGTASQVPTRRRNHNGYLLRWDGEGLLFDPGEGTQRQLTLAGVSATDITRIC
LTHFHGDHCLGVPGVVQRLSLDRVARPVHAHYPASGTDHFRALRHACAFHDVLDLREEPV
DRDGPIAVGAFGTLSARALDHRVQTFGYRLVEPDGRSIRPDLLDRHGLSGPIVGRLQRDG
EVVVDGRTVRLADVSEPRRGQRFAFIMDTRLCDAVFALADGADLLVIESTFLSEDQALAE
EYRHLTAAQAGRVAAECGVRTLVLTHFSQRYDDPARFHAEAAAVFSGDVVVAEDLMRVPV
PKRRG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtctccccgggaactggtcgtgctgggcaccgcgagccaggtgccgacgcggcggcgc
aaccacaacggctacctgctgcggtgggacggggaggggctgctgttcgacccgggggag
gggacgcagcggcagctgacgctggcgggggtgtccgccaccgacatcacccggatctgc
ctgacccacttccacggcgaccactgcctcggcgtccccggcgtcgtgcagcggctgtcg
ctggaccgggtggcccgtcccgtccacgcgcactacccggcgagcgggaccgaccacttc
cgcgctctgcgccacgcctgcgcgttccacgacgtgctggacctgcgggaggagccggtc
gaccgcgacggcccgatcgcggtgggggcgttcggcacgctgtcggcgcgggcgctggac
caccgcgtgcagaccttcggctaccggctggtcgagccggacgggcggagcatccggccg
gacctgctggaccgccacggcctgtccggcccgatcgtcggccgactgcagcgggacggg
gaggtggtcgtcgacggccggacggtccggctggccgacgtcagcgagccgcgccggggg
cagcggttcgcgttcatcatggacacccgcctgtgcgacgcggtcttcgccctcgcggac
ggcgcggacctgctcgtcatcgagtccaccttcctgtcggaggaccaggccctcgctgag
gagtaccgccacctgacggccgcccaggccgggcgcgtggccgccgagtgcggggtccgc
acgctggtgctgacccacttctcccagcgctacgacgacccggcccggttccacgcggag
gcggcggcggtgttctccggggacgtcgtggtcgccgaggacctcatgcgggtccccgtc
ccgaagcggcgggggtag
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