Actinokineospora sp. UTMC 2448: Actkin_04780
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Entry
Actkin_04780 CDS
T08397
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
actu
Actinokineospora sp. UTMC 2448
Pathway
actu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
actu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Actkin_04780 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
actu03019
]
Actkin_04780 (pnp)
03016 Transfer RNA biogenesis [BR:
actu03016
]
Actkin_04780 (pnp)
Enzymes [BR:
actu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Actkin_04780 (pnp)
Messenger RNA biogenesis [BR:
actu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Actkin_04780 (pnp)
Transfer RNA biogenesis [BR:
actu03016
]
Prokaryotic type
tRNA degradation factors
Actkin_04780 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
MUG2_C
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
UVS81028
LinkDB
All DBs
Position
complement(5260062..5262308)
Genome browser
AA seq
748 aa
AA seq
DB search
MTEPTVHETTATIDNGAYGTRTVRFETGRLARQAAGSVVAYLDEETMLLSATTASKHPKE
QFDFFPLTVDVEERMYAAGRIPGAFFRREGRPSTDAILACRLIDRPLRPSFVDGLRNEIQ
VVVTVMSLHPQDLYDVVAINAASASTQLAGLPFSGPVGGVRVALIEGQWVAFPTHEQLEK
AVFDMVVAGRVVGDDVAIMMVEAEATDNVIDLIGAGAQAPTEEVVAAGLEAAKPFIKVLC
EAQAELASLAAKETAEFPVFPAYQPDAFEAVAAAVSDELAQALTIAGKQERESRLDEVKA
LCLEKLATNDAFSGREKEIGAAFRALNKKLVRQRILREKVRIDGRGLTDIRQLGAEVAVV
PRAHGSALFERGETQIMGVTTLNMLRMEQTIDSLSPETTKRYLHHYNFPPYSTGETGRVG
SPKRREIGHGALAERALIPVLPKRDEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAG
VPLKAMVSGIAMGLVSDEVDGKTEYVALTDILGAEDAFGDMDFKVAGTKEFVTALQLDTK
LDGIPSAVLAGALGQARDARLTLLEVMAEAIDRPDEMSAYAPRVTSVKIPVDKIGEVIGP
KGKMINSITEQTGADISIEDDGTIYVGAADGPSAEAAIGLINAIANPQLPKVGERFLGTV
VKTAAFGAFVSLLPGKDGLIHISKLGGGKRINKVEDVVKVGDKLRVEIADIDQRGKISLV
LVKDEENAESAEAAGSTTDDSAEATTQS
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacccaccgtgcacgagaccacggcgaccatcgacaacggcgcctacggcacc
cgcaccgtccgcttcgagaccggcaggctggcccgccaggccgcgggcagcgtcgtcgcc
tacctcgacgaggagaccatgctcctctcggcgaccaccgcgtcgaagcacccgaaggag
cagttcgacttcttcccgctgacggtggacgtcgaggagcgcatgtacgccgcgggccgc
atccccggcgcgttcttccgccgcgagggccgtccctccaccgacgcgatcctggcctgc
cgcctgatcgaccggccgctgcgcccgtccttcgtcgacggtctgcgcaacgagatccag
gtcgtcgtcaccgtgatgagcctgcacccgcaggacctctacgacgtggtggccatcaac
gccgcctccgcctccacccagctcgcgggcctgccgttctccggcccggtcggcggcgtg
cgcgtcgcgctgatcgagggccagtgggtggcgttcccgacccacgagcagctcgagaag
gccgtgttcgacatggtcgtcgccgggcgcgtggtcggcgacgacgtggcgatcatgatg
gtcgaggccgaggccaccgacaacgtgatcgacctgatcggcgcgggcgcgcaggcgccc
accgaggaggtcgtggccgccggtctggaggccgccaagccgttcatcaaggtgctgtgc
gaggcccaggccgagctggcctccctggccgccaaggagaccgccgagttcccggtgttc
cccgcctaccagcccgacgccttcgaggccgtcgccgccgccgtcagcgacgagctggcc
caggcgctgaccatcgcgggcaagcaggagcgggagagccgcctcgacgaggtcaaggcg
ctgtgcctggagaagctggccaccaacgacgcgttctccggccgggagaaggagatcggc
gccgcgttccgggcgctgaacaagaagctggtgcgccagcgcatcctgcgcgagaaggtc
cgcatcgacggccgcggcctgaccgacatccgccagctcggcgccgaggtggccgtggtg
ccccgggcgcacggctcggcgctgttcgagcgcggcgagacccagatcatgggcgtcacc
acgctgaacatgctgcgcatggagcagaccatcgactcgctctccccggagacgacgaag
cggtacctgcaccactacaacttcccgccgtactccaccggtgagaccggccgggtcggc
tcgcccaagcggcgcgagatcggccacggcgcgctggccgagcgggcgctcatccccgtg
ctgcccaagcgcgacgagttcccctacgccatccgccaggtctccgaggcgctgggctcc
aacggctcgacctcgatgggctcggtctgcgcgtccacgatgtcgctgctcaacgccggt
gtcccgctgaaggccatggtctcgggcatcgccatgggcctggtctccgacgaggtcgac
ggcaagaccgagtacgtcgcgctgaccgacatcctcggcgccgaggacgccttcggcgac
atggacttcaaggtcgcgggcaccaaggagttcgtcaccgcgctgcagctggacaccaag
ctcgacggcatcccgtccgcggtgctggcaggcgcgctcggccaggcccgcgacgcccgg
ctgacgctgctggaggtcatggccgaggccatcgaccgcccggacgagatgagcgcctac
gccccgcgcgtgacctcggtgaagatcccggtcgacaagatcggcgaggtgatcggcccc
aagggcaagatgatcaactcgatcaccgagcagaccggcgccgacatctccatcgaggac
gacggcacgatctacgtcggcgcggcggacggcccctcggccgaggcggccatcggcctg
atcaacgccatcgcgaacccgcagctgcccaaggtcggcgagcggttcctcggcaccgtg
gtgaagacggcagcgttcggcgccttcgtctcgctgctgcccggcaaggacggcctgatc
cacatctccaagctcggcgggggcaagcggatcaacaaggtcgaggacgtggtcaaggtc
ggcgacaagctccgcgtggagatcgccgacatcgaccagcgcggcaagatcagcctggtg
ttggtcaaggacgaggagaacgccgagtccgccgaggccgccgggtccaccaccgacgac
tcagcagaggcgaccacccagtcgtga
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