Actinokineospora sp. UTMC 2448: Actkin_04945
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Entry
Actkin_04945 CDS
T08397
Symbol
ddl_1
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
actu
Actinokineospora sp. UTMC 2448
Pathway
actu00470
D-Amino acid metabolism
actu00550
Peptidoglycan biosynthesis
actu01100
Metabolic pathways
actu01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
actu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Actkin_04945 (ddl_1)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Actkin_04945 (ddl_1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Actkin_04945 (ddl_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
actu01011
]
Actkin_04945 (ddl_1)
Enzymes [BR:
actu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Actkin_04945 (ddl_1)
Peptidoglycan biosynthesis and degradation proteins [BR:
actu01011
]
Precursor biosynthesis
Amino acid ligase
Actkin_04945 (ddl_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_3
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
UVS81190
LinkDB
All DBs
Position
complement(5425584..5426660)
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AA seq
358 aa
AA seq
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MGKIRVAVVFGGQSTEHAVSCVSAASVLTHLDPERFEAVPVGITPAGRWVLGPSDPERLR
ISGRTLPSVSEGTALTLPAAADALVLLEPGREGEVLSSVDVVFPVLHGAYGEDGTIQGLL
EMVGLPYVGAGVLASAVAMDKGFTKKVLAAESLPIGRYVDLPRGRADLTDDERAHLGLPV
FVKPSRAGSSTGITKVTEWAALPAAVEHARTIDPKVLVEAAIAGREVECAVLEYPDGRVE
ASQPAEIRLNDGVDWYDFEAKYLDVGDLDIPAKLDDAVTERVRATAVAAFRALDCQGLAR
VDFFVAEDGSLIINEVNTMPGFTPTSAYPKMWAVTGVDYRTLVSTLIDTAIARGAGLR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaatcagggttgcggtggttttcggcgggcagagcaccgagcacgcggtctcc
tgcgtgtccgcggcgagtgtgctgacccacctcgaccccgagcggttcgaggccgtgccc
gtggggatcacgcccgcgggtcggtgggtgctcgggccgtccgatcctgagcggctgcgg
atctccgggcggaccctgcccagcgtgtccgaggggaccgcgttgacgttgcccgccgcg
gccgacgcgctggtgctgttggagccgggacgggagggggaggtgctctcctccgtcgac
gtcgtcttccccgtgctgcacggcgcgtacggcgaggacgggaccatccaggggctgctg
gagatggtcggcctcccctacgtcggcgctggcgtgctcgccagcgccgtcgccatggac
aaggggttcaccaagaaggtcctcgccgccgagtcgctgcccatcgggcggtacgtggac
ctgccccgcgggcgcgccgacctcaccgacgacgagcgcgcgcacctgggcctgcccgtc
ttcgtcaagccctcccgcgcgggctcgtccaccggcatcaccaaggtgaccgagtgggca
gcgctgcccgccgccgtcgagcacgcgcggaccatcgaccccaaggtgctcgtcgaggcc
gcgatcgcgggccgcgaggtcgagtgcgccgtcctggagtacccggacggccgcgtggag
gcgtcccagcccgccgagatcaggctgaacgacggcgtcgactggtacgacttcgaggcc
aagtacctcgacgtcggcgacctcgacatccccgccaagctcgacgacgccgtcaccgag
cgggtgcgcgcgacggccgtcgccgcgttccgggcgctggactgccaggggctggcccgg
gtcgacttcttcgtcgccgaggacggctcgctgatcatcaacgaggtcaacacgatgccc
gggttcacccccacctcggcctacccgaagatgtgggcggtcaccggcgtggactaccgg
acgctggtgtccacgctgatcgacaccgcgatcgcccgcggcgccgggctgcgctga
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