Actinokineospora sp. UTMC 2448: Actkin_06436
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Entry
Actkin_06436 CDS
T08397
Symbol
end
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
actu
Actinokineospora sp. UTMC 2448
Pathway
actu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
actu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Actkin_06436 (end)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
actu03400
]
Actkin_06436 (end)
Enzymes [BR:
actu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Actkin_06436 (end)
DNA repair and recombination proteins [BR:
actu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Actkin_06436 (end)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
UVS82662
LinkDB
All DBs
Position
complement(6954363..6955133)
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AA seq
256 aa
AA seq
DB search
MSIGAHVRDDDPIGAARERGADVVQFFLSDPQGWAAPKPHPQTDELLAADLTVFIHSPYR
VNLASTNNRIRIPSRKLVVQHAEGAAAVGAKGLVVHGGHVTKDADPAEGLVNWRKFFERQ
SKEGGFAVPILIENTAGGDNAMARRFDMLARLWDEVGEFGAGFCLDTCHAWAAGEDLVDV
VDRVKAITGRIDLVHLNSSRDEFDSARDRHDNIRTGTIDADQLVAVVAAAGAPVVVETPS
EGQAEDIAFLRAALGR
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcggcgcccacgtccgcgatgacgacccgatcggcgcggcgcgcgagcgcggc
gccgatgtcgtccagttcttcctgtccgacccgcaggggtgggcggcgccgaagccgcac
ccgcagaccgatgagctgctggccgcggacctgacggtgttcatccactccccctatcgg
gtcaacctggcgagcacgaacaaccgcatccgcatcccgtcgcgaaagctcgtcgtgcag
cacgcggagggcgccgcggcggtcggcgcgaagggcctggtcgtgcacggcggccacgtc
accaaggacgccgacccggccgagggcctggtcaactggcgcaagttcttcgagcggcag
agcaaggagggcggcttcgccgtccccatcctgatcgagaacaccgcgggcggcgacaac
gccatggcccgccgcttcgacatgctcgcccggctctgggacgaggtgggcgagttcggc
gccgggttctgcctggacacctgccacgcctgggcggctggcgaggacctcgtcgacgtc
gtcgaccgggtcaaggcgatcaccgggcgcatcgacctggtccacctgaacagctcgcgc
gacgagttcgactccgcccgcgaccggcatgacaacatccgcactggcacgatcgatgcg
gaccaactcgtggcggtcgtggccgcggcgggcgcgccggtcgtcgtcgagacacccagt
gagggtcaggcggaggacatcgcgttcctgcgcgccgcgctcgggcggtga
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