Actinomadura sp. WMMB 499: F7P10_03985
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Entry
F7P10_03985 CDS
T06213
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
actw
Actinomadura sp. WMMB 499
Pathway
actw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
actw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F7P10_03985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
actw03400
]
F7P10_03985
Enzymes [BR:
actw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
F7P10_03985
DNA repair and recombination proteins [BR:
actw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F7P10_03985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
HHH_5
Viral_helicase1
AAA_11
Helicase_RecD
AAA_22
PhoH
DEAD
PIF1
AAA_16
NPHP3_N
AAA_28
nSTAND3
UvrD_C
TraI_hel_assoc_N
HHH_2
UvrD-helicase
P-loop_TraG
HTH_IclR
AAA
AAA_10
DAP3
Motif
Other DBs
NCBI-ProteinID:
QFG20449
UniProt:
A0A5J6TZ70
LinkDB
All DBs
Position
complement(918644..920854)
Genome browser
AA seq
736 aa
AA seq
DB search
MSDVTTPSRAVLEAVLERITYANDETGYTVARVATARGGDDLLTVVGALLGAQVGESLRL
TGWWRSHPKYGRQFEVESYTTVLPATVQGIRRYLGSGMIKGIGPVMADRMVEHFGADILR
IIEEEPKRLVEVPGLGPKRTKRIGDAWEEQKAIKEVMVFLQGVGVSTSLAVRVYKQYGDA
SIDTVRRDPYRLAADVWGIGFKTADTIAQAVGIPHDSPERIRAGLQYTLSEAADDGHCFL
PEPNLVTAAEKILEVPRELIGPALDDLAASEGVVRDPVPGDDTTIPAVYLVPFHRAEGSL
ARGLRELLDSREDRLAAFADVDWGKALPWLRERTGTELAPEQEEAVKLALTSKVAVLTGG
PGCGKSFTVRSVVELAAAKRAKIVLVAPTGRAAKRLAELTGHEAATVHRLLQLQPGGDAA
YDQDNPLDADLVVVDESSMVDLILANKLVKAIPRGAHLLLVGDVDQLPSVGAGEVLADLL
GSATIPRVRLTKIFRQAQQSGIVVNAHRVNSGDHPHTRGYPDFFLFPCEEQEEAAELTRD
VVANRIPRKFGLDPRRDIQVLAPMHRGAAGAGALNTLLQEALTPHDEARPERRYGGRVFR
VGDKVTQLRNNYDKGEAGVFNGTVGVVTKVSLEDQSLTVLTDEDESIDYAFDELDELAHA
YAITIHRSQGSEYPAVVVPLTTGAWTMLRRNLLYTGITRAKKLVVLVGSRRALAAAVRTA
GAGRRHTALRHRLDHR
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgtgaccactccatcccgggccgtcctggaggcggtactcgaacgcatcacc
tacgccaacgacgagaccggctacaccgtcgcccgcgtcgccacggcgcgcggcggcgac
gacctgctgacggtcgtcggggccctgctgggcgcccaggtgggggagagcctgcggctg
accggatggtggcgttcgcacccgaagtacggccgccagttcgaggtggagtcgtacacg
acggtgctgcccgcgacggtccagggcatccggcgctacctcggctcggggatgatcaag
ggcatcgggccggtgatggccgaccggatggtcgagcacttcggcgccgacatcctgcgg
atcatcgaggaggagccgaagcggctcgtcgaggtgcccggcctcggcccgaagcgcacc
aagcggatcggcgacgcgtgggaggagcagaaggccatcaaggaggtgatggtcttcctg
cagggcgtcggcgtctccacctcgctggccgtccgcgtctacaagcagtacggggacgcc
tccatcgacaccgtccgccgggacccctaccgcctcgccgcggacgtgtggggcatcggc
ttcaagaccgccgacacgatcgcgcaggccgtcggcatcccgcacgacagcccggagcgg
atcagggccgggctccagtacacgctgtcggaggccgccgacgacgggcactgcttcctg
ccggaacccaacctcgtcacggccgccgagaagatcctcgaggtcccccgcgaactgatc
ggccccgcgctggacgacctggccgcgtccgaaggcgtggtgcgggatccggtccccggg
gacgacacgacgatccccgccgtctacctcgtcccgttccaccgcgcggagggctccctc
gcgcgcggcctccgcgaactcctcgacagccgggaggaccgcctcgcggccttcgccgac
gtggactggggaaaggcgctgccctggctccgcgaacgcaccggcaccgagctcgccccc
gagcaggaggaggccgtcaagctcgccctcacctcgaaggtggccgtcctcaccgggggt
ccgggctgcggcaagagcttcaccgtccgctccgtcgtcgaactcgccgccgccaagcgg
gccaagatcgtcctcgtcgcgcccaccggccgcgccgcgaaacggctcgccgagctgacc
gggcacgaggccgcgaccgtccaccggctgctgcagctccagcccggcggcgacgccgcc
tacgaccaggacaaccccctcgacgccgacctcgtcgtcgtcgacgaatcgtcgatggtc
gacctgatcctggcgaacaagctggtcaaggccatcccccggggcgcgcacctgctgctg
gtcggggacgtcgaccagctcccgtccgtcggcgccggcgaggtgctcgccgacctgctc
ggctcggcgacgatcccgcgggtgcgcctcacgaagatcttccggcaggcgcagcagtcg
ggcatcgtcgtcaacgcgcaccgcgtcaactccggcgaccacccgcacacccgcggctac
cccgacttcttcctgttcccctgcgaggagcaggaggaggcggcggagctgacgcgggac
gtcgtcgccaaccgcatcccccgcaagttcggcctcgacccccgccgcgacatccaggtc
ctcgcgcccatgcaccgcggcgccgccggtgcgggcgcgctgaacaccctgctccaggag
gcgctcaccccgcacgacgaggcccgccccgagcgccgctacggcggccgcgtcttccgc
gtcggcgacaaggtcacccagctccgcaacaactacgacaagggagaggccggggtgttc
aacggcaccgtcggcgtcgtcacgaaggtctccctggaggaccagtccctcaccgtcctc
accgacgaggacgagagcatcgactacgcgttcgacgaactcgacgagctcgcccacgcc
tacgcgatcacgatccaccgctcgcagggcagcgagtacccggccgtggtcgtcccgctc
accaccggggcctggacgatgctgcgccgcaacctgctctacaccggcatcacccgcgcg
aagaagctcgtcgtcctcgtgggctcccgccgcgcgctggccgccgccgtccgcaccgcc
ggcgccggccgccgccacacggcgctccggcaccggctcgaccaccggtag
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