Actinomadura sp. WMMB 499: F7P10_05630
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Entry
F7P10_05630 CDS
T06213
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
actw
Actinomadura sp. WMMB 499
Brite
KEGG Orthology (KO) [BR:
actw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
actw03016
]
F7P10_05630
Enzymes [BR:
actw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
F7P10_05630
Transfer RNA biogenesis [BR:
actw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
F7P10_05630
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Major_capside
Motif
Other DBs
NCBI-ProteinID:
QFG26860
UniProt:
A0A5J6UIK4
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All DBs
Position
1322822..1324195
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AA seq
457 aa
AA seq
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MSETRASGPERGPGARKAAGTVPDPTGGDPPAAGAAGSGTAADEARNGTSGDAPAAVPLL
EPREGVPAVVADAAALDRVIAAFAAGNGPVAVDAERASGYRYGQRAYLVQLRRAGAGTAL
IDPVACPDLSGLDATLADAEIVLHAANQDLPCLAEVGLAPRRLFDTELAGRLLGYPRVGL
GSMVENVLGFLLEKGYSAADWSNRPLPDDWLRYAALDVELLVELRDALHDQLAAAGKLEW
ALEEFAAILATPPKPPRADPWRRTSGIHRVRNRRALAIVRSVWEMRDKIARERDLSPGRV
LQDAAIIELAQQAPQSLPDLQALPTMRGRAARRHQSAWLRAVARARELPDRRLPAANVPG
DGPPPAHRWADRDPEAAKRLTAARAVVAALAEEHSMPAENLLQPDVVRRLAWTPPDEPSA
SVIGAELRRLGARNWQAALTARPIARAFLRLETKGDL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagacgcgcgcctccggtcccgagcggggaccgggtgcgcggaaggctgccggg
accgttccagaccccaccggcggcgacccgcccgccgcgggcgccgccggctccgggacg
gccgcggacgaggcgcggaacgggacgtccggggacgcgcccgcggccgtcccgctgctg
gagccgcgggagggcgtgccggccgtcgtcgcggacgccgccgcgctggaccgcgtgatc
gccgcgttcgccgccgggaacggtccggtcgcggtcgacgcggagcgcgcgtccggctac
cggtacgggcagcgcgcctacctggtccagctgcggcgggccggggcgggcaccgcgctg
atcgacccggtcgcctgccccgacctgtccgggctggacgccacgctcgcggacgccgag
atcgtgctgcacgccgccaaccaggacctgccgtgcctcgccgaggtcgggctcgcgccg
cggcggctgttcgacaccgagctggccgggcgcctcctcggctacccccgcgtcgggctc
ggctcgatggtcgagaacgtcctcggcttcctcctggagaaggggtactcggcggccgac
tggtccaaccggcccctccccgacgactggctgcgctacgcggcgctggacgtcgagctg
ctcgtcgagctgcgcgacgccctgcacgaccagctggccgcggccgggaagctcgagtgg
gcgctggaggagttcgcggcgatcctcgccacgccgccgaagccgccgcgcgccgacccg
tggcggcggacgtccgggatacaccgggtgcgcaaccggcgcgcgctcgcgatcgtccgg
tcggtgtgggagatgcgcgacaagatcgcccgcgagcgggacctgtcccccggccgcgtc
ctgcaggacgcggcgatcatcgagctggcgcagcaggccccgcagagcctgcccgacctg
caggcgctgcccacgatgcggggacgcgccgcccggcggcaccagtcggcgtggctgcgg
gccgtcgcgcgcgcccgcgagctgcccgaccggcggctcccggcggcgaacgtccccggc
gacggcccgccgcccgcgcaccgctgggccgaccgcgaccccgaggccgccaagcggctc
accgcggcccgcgcggtcgtcgcggccctcgccgaggagcactcgatgccggccgagaac
ctcctgcagcccgacgtggtccggcgcctcgcgtggacgccgccggacgagccgtccgcg
tcggtgatcggcgcggagctgcggcggctcggcgcccgcaactggcaggcggccctcacc
gcccggccgatcgcgcgcgcgttcctgcggctggagaccaagggcgacctttag
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