Actinomadura sp. WMMB 499: F7P10_10205
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Entry
F7P10_10205 CDS
T06213
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
actw
Actinomadura sp. WMMB 499
Pathway
actw03030
DNA replication
actw03430
Mismatch repair
actw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
actw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F7P10_10205 (dnaE)
03430 Mismatch repair
F7P10_10205 (dnaE)
03440 Homologous recombination
F7P10_10205 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actw03032
]
F7P10_10205 (dnaE)
03400 DNA repair and recombination proteins [BR:
actw03400
]
F7P10_10205 (dnaE)
Enzymes [BR:
actw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F7P10_10205 (dnaE)
DNA replication proteins [BR:
actw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F7P10_10205 (dnaE)
DNA repair and recombination proteins [BR:
actw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F7P10_10205 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
RecX
Motif
Other DBs
NCBI-ProteinID:
QFG21447
UniProt:
A0A5J6U3K5
LinkDB
All DBs
Position
complement(2373451..2377047)
Genome browser
AA seq
1198 aa
AA seq
DB search
MSAARNRRQPGGVVDSFVHLHVHTEYSMLDGAAKVGPLMDEVARQGMPAVAMSDHGNVHG
AYEFFHAANKAGVKPVIGIEAYVAPASRHHRRPVFWSDDPSLRKSDETTGAGGDVSGRGL
YTHMTMWAVDAAGLRNLFRLQSRAWLEGHVQKYPRMDAELLAEHGAGIVATTGCPSGEVQ
TRLRLGQYAEAVEAAARYRDVFGPGNYFLELMDHGLPIERRVREDLIRIGRDLDLPPLAT
NDSHYVTESQAEAHDALLCIGTGKRLADENRFRFVGSGYYVKSAAEMRAMWDAEVPGACD
NTLLIAERAGDYGEVFAHRDLMPRFPVPDGETEASWLRAEALRGARDRFGDEPPQDVLDR
IDYELSVITDMGFPGYFLVVADICRYARENGIGLGPGRGSATGSMVAYCVGITELDPIEH
RLIFERFLNPERITMPDVDLDFDDRRREEMIDYVTRRYGDDRVCQIVTFGTIKAKAAVKD
ACRVLGYPYALGDRITKAFPAAEGGKEIPLAAIHDAGHRRHGEAAELRRMYADEPDVKRV
LDTAVGVEGLTRGTGVHAAGVILSSEPLLDVLPLVRPKADGPVVTGFPFTQAEDMGLLKM
DFLGLRNLTVIHDAVVGVKANRGVDVDIRTAPLDDATTYELLARGDTLGVFQLDSGGMRV
LLRMMRPTTFTDIAAVNALYRPGPMEMDAHTNYALRKTGRQKVEPIHPELEEALEPILGD
TYHLVVFQEQVMAIAQQLAGYSLGAADMLRRAMGKKKKEVLDAEWERFSTGMRERGFSAD
AIKAVWDVLLPFSGYGFNKSHTAGYGLVSYWTAYLKANYPAEYMAALLSSVGDDKDRMGV
YLSDCRRLGIRVLPPDVNQSVLDFAAVGDDVRFGLGAVRNVGAGVVDAIVRTRADRGAYT
SFDDFLAKVPAQVCNKRVLESLAKAGAFDGLGHHRKGIVAIHERAADAVVDVKRREAHGQ
DALFGATAGPGAGDTGLAVAIPDGEWDKATLLAHEREMLGLYVSSHPLDGTEPILERHRD
RTIAELLASGRADGRVRLSGIISGLQRKVTKRGDPWAIVALEDHDASVECLVFPKSHMLY
GHALAEDRVVSLEGRINLRDDTISVYAEEVTVLDVTGPDAAEPPVVITVAEPRVTPRLVA
DLKGILAAHPGAAPVHLLLRRGGPTSVLFDLVPFRVAPDAALFGDVKSLLGPDSVTRS
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggcgaggaatcggcgacaaccgggaggggtagtggactcgttcgtccatctc
cacgtgcacaccgagtactcgatgctggacggcgccgcgaaggtcggcccgctgatggac
gaggtcgcgcggcaggggatgcccgcggtcgcgatgagcgaccacggaaacgtgcacggc
gcctacgagttcttccacgccgcgaacaaggccggggtgaagccggtcatcggcatcgag
gcgtacgtggcgcccgcgtcccggcaccaccggcggcccgtgttctggagcgacgacccg
tccctgcggaagtcggacgagacgaccggtgcgggcggcgacgtgtccgggcggggcctc
tacacccacatgacgatgtgggcggtggacgcggcgggcctgcggaacctgttccggctg
caatctcgcgcgtggctggaggggcacgtgcagaagtacccgcggatggacgccgagctg
ctcgccgagcacggggcgggcatcgtcgccacgaccggctgcccgtccggcgaggtgcag
acgcggctgcggctcgggcagtacgcggaggcggtcgaggccgccgcacggtaccgggac
gtcttcgggcccggcaactacttcctcgagctgatggaccacgggctgccgatcgaacgc
cgcgtccgcgaggacctgatccggatcggccgggacctcgatctgccgcccctcgccacg
aacgactcccactacgtcaccgagagccaggcggaggcgcacgacgcgctgctgtgcatc
ggcaccggcaagcggctcgccgacgagaaccgcttccggttcgtcggcagcggctactac
gtcaagagcgcggcggagatgcgcgcgatgtgggacgccgaggtgcccggggcctgcgac
aacacgctcctgatcgccgaacgcgcgggcgactacggcgaggtgttcgcgcaccgcgac
ctgatgccgcgcttccccgttccggacggggagaccgaggcgtcctggctgcgcgccgag
gcgctccggggcgcccgcgaccgcttcggggacgaaccgccgcaggacgtcctcgaccgg
atcgactacgagctgtcggtcatcaccgacatggggttccccgggtacttcctggtggtc
gccgacatctgccggtacgcgcgcgagaacggcatcgggctcggcccggggcgcggctcg
gcgacgggctcgatggtcgcgtactgcgtcggcatcaccgagctggacccgatcgagcac
cggctgatcttcgagcggttcctgaaccccgagcggatcacgatgccggacgtcgacctc
gacttcgacgaccgccgccgcgaggagatgatcgactacgtcacccgccggtacggcgac
gaccgggtgtgccagatcgtcacgttcggcaccatcaaggcgaaggcggcggtcaaggac
gcctgccgcgtgctcggctacccgtacgcgctcggcgaccgcatcaccaaggcgttcccg
gcggccgagggcggcaaggagatccccctcgccgccatccacgacgccggccaccggcgg
cacggcgaggccgccgaactccgccggatgtacgcggacgaaccggacgtcaagcgcgtc
ctcgacacggccgtcggcgtcgagggactcacccgggggacgggcgtgcacgccgccggg
gtgatcctgtcgtccgagccgctcctggacgtcctgccgctcgtccgcccgaaggccgac
gggccggtcgtcaccggcttcccgttcacgcaggccgaggacatgggcctgctcaagatg
gacttcctcggcctgcgcaacctcaccgtcatccacgacgccgtcgtgggcgtcaaggcg
aaccggggcgtggacgtcgacattcgcacggccccgctggacgacgcgacgacctacgag
ctgcttgcgcgcggcgatacgctcggcgtcttccagctcgactccggcggcatgcgcgtc
ctgctgcggatgatgcggccgacgacgttcaccgacatcgccgccgtcaacgccctgtac
cggcccggcccgatggagatggacgcccacaccaactacgcgttgcgcaagacgggccgc
cagaaggtcgagccgatccacccggaactcgaggaggccctcgaaccgatcctcggcgac
acctaccacctggtcgtcttccaggagcaggtcatggccatcgcgcagcagctcgccggg
tactcgctcggcgccgccgacatgctgcgccgcgccatgggcaagaagaagaaagaagtc
ctggacgccgagtgggagcggttctcgaccgggatgcgcgagcgcggcttctccgccgac
gcgatcaaggccgtctgggacgtcctcctcccgttcagcggctacggcttcaacaagagc
cacaccgccgggtacgggctcgtctcgtactggacggcctacctcaaggcgaactacccg
gccgagtacatggccgcgctcctcagttccgtgggggacgacaaggacaggatgggcgtg
tacctgtccgactgccgccgcctcggcatccgcgtcctgccgcccgacgtcaaccagagc
gtcctcgacttcgccgccgtcggcgacgacgtccgcttcggcctcggcgcggtccgcaac
gtcggcgcgggcgtcgtcgacgcgatcgtccggacccgcgcggacaggggcgcctacacc
tcgttcgacgacttcctcgccaaggtgcccgcgcaggtgtgcaacaagcgggtgctggag
tcgctcgcgaaggccggggcgttcgacggcctcggccaccaccgcaagggcatcgtcgcg
atccacgagcgggccgccgacgcggtcgtggacgtcaagcgccgcgaggcgcacgggcag
gacgcgctgttcggcgcgaccgccggccccggcgccggggacaccggcctcgcggtcgcg
atcccggacggcgagtgggacaaggccaccctgctcgcccacgagcgggagatgctcggc
ctgtacgtgtcgagccatccgctggacggcaccgagccgatcctcgaacggcaccgcgac
cggacgatcgccgaactgctcgcgtccggccgggccgacgggcgcgtccggctcagcggc
atcatctccggcctgcagcgcaaggtcaccaagcggggcgacccgtgggcgatcgtcgcg
ctggaggaccacgacgcgtccgtcgaatgcctcgtcttcccgaaaagccacatgttgtac
gggcatgccctcgcggaggatcgcgtcgtgtcgctggagggaaggatcaacctgcgcgac
gacacgatcagcgtctacgccgaggaggtgaccgtcctggacgtgaccggaccggacgcc
gccgaaccgcccgtcgtcatcacggtcgcggagccgcgggtgacgccgcggctcgtcgcc
gacctgaaggggatcctcgcggcccatccgggtgccgcgccggtgcacctgctgctccgg
cgcggcggcccgacgagcgtgctgttcgacctcgtcccgttccgggtcgccccggacgcg
gccctgttcggcgacgtgaagtcgctgctgggcccggactcggtcacccgctcctga
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