Actinomadura sp. WMMB 499: F7P10_19880
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Entry
F7P10_19880 CDS
T06213
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
actw
Actinomadura sp. WMMB 499
Pathway
actw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
actw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F7P10_19880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
actw03400
]
F7P10_19880
Enzymes [BR:
actw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
F7P10_19880
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
F7P10_19880
DNA repair and recombination proteins [BR:
actw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
F7P10_19880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
Zn_ribbon_8
YbaB_DNA_bd
Prok-RING_1
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
QFG23043
UniProt:
A0A5J6U7P7
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All DBs
Position
complement(4534008..4534871)
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AA seq
287 aa
AA seq
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MPELPEVEALTAFLRERAVGRVVARVDVLAISALKTYDPPVTALGGLTVTGAARRGKFID
LDVDGVHLVIHLARAGWLRWHDEVPTRPARPGGKNPLALRLHLDDGSGFDLTEAGTKKGL
AVYVVRDPADVPGVAALGPDPLDEAFTPRALHEIVAGKRTQIKGLLRDQKVIAGIGNAYS
DEVLHVARMSPFKIAATLDDTDVATLHDAIVTTLRDAVERSRGLQAQDLKGEKKTGLRVH
GRTGEKCPVCGDTVREVSFADSSLQYCPTCQTGGKPLADRRMSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttgccagaggtcgaggcgctgaccgccttcctgcgcgagcgcgcggtcggc
cgcgtcgtcgcccgcgtcgatgttctcgccatctccgcgctgaagacctacgacccgccg
gtgaccgccctcggcggcctcaccgtcaccggcgccgcccggcgcggcaagttcatcgac
ctcgacgtcgacggcgtccacctcgtgatccacctcgcccgcgccggatggctccgctgg
cacgacgaggtcccgaccagacccgcgagacccggcggcaagaacccgctcgccctccgc
ctgcacctcgacgacggctccggcttcgacctcaccgaggccggcaccaagaagggcctc
gccgtctacgtcgtccgcgaccccgccgacgtccccggcgtcgccgccctcggccccgac
ccgctggacgaggcgttcaccccgcgggccctgcacgagatcgtcgcgggcaagcgcacg
cagatcaagggcctgctccgcgaccagaaggtcatcgcgggcatcggcaacgcctactcc
gacgaggtcctgcacgtcgcccggatgtccccgttcaagatcgccgccacgctcgacgac
accgacgtcgccactctgcacgacgcgatcgtcaccaccctgcgggacgcggtcgaacgc
tcgcgcggcctccaggcgcaggacctcaagggcgagaagaagaccggcctgcgcgtccac
ggccgcaccggcgagaaatgccccgtctgcggcgacaccgtccgcgaggtctccttcgcc
gactcgtccctgcagtactgccccacctgccagaccggaggcaagcccctggccgaccgc
cgcatgtcccgcctgctcaaatga
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