Actinomadura sp. WMMB 499: F7P10_22100
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Entry
F7P10_22100 CDS
T06213
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
actw
Actinomadura sp. WMMB 499
Pathway
actw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
actw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F7P10_22100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
actw03021
]
F7P10_22100
03019 Messenger RNA biogenesis [BR:
actw03019
]
F7P10_22100
Transcription machinery [BR:
actw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
F7P10_22100
Messenger RNA biogenesis [BR:
actw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F7P10_22100
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
NACHT
AAA_25
Spore_III_AA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QFG23406
LinkDB
All DBs
Position
complement(4975923..4977146)
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AA seq
407 aa
AA seq
DB search
MSTSTLSTGRAPGTDVRRGHGVPAQGARKAGQRRAPAGDEPLVPFSGILAVQDKHAFVRT
SGYLAGPEDVHVSLAQIRAHHLRPGDIVAGTARPPKSGRDKFRSLAGLETVNGGPPADAA
GRPDFGKLTPLFPDERLRLDTGPLATRVIDLVAPIGKGQRGLIVSPPKVGKTMMLQALAN
GIARGNPEAHLMVVLIDERPEEVTDLQRTVEGEVLHSTFDRPAQDHTALAELAVERAKRL
VEQGHDVVMLLDSITRLGRAYNLAAPSSSRILAGGVATTAIYPPKKFFGAARNIEEGGSL
TILATALVETGSRMDDVLFEEYKGTGNMELKLDRGLADRRIFPAVDVEASGTRRDELLMS
PQELELTWRLRRALSGLDRQGAVEHLLEKMKGTSSNAEFLLRLQQTL
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttccaccctgagcaccggccgcgcccccggcacggacgtccggcgggggcac
ggcgtgcccgcgcagggcgcccgcaaggccgggcagcggcgcgcaccggccggtgacgaa
ccgctcgtcccgttcagcggcatcctcgccgtccaggacaagcacgcgttcgtgcgcacc
tccggctacctcgcggggcccgaggacgtgcacgtctccctcgcccagatcagggcgcac
cacctgcggcccggcgacatcgtcgcgggcacggcccggccgccgaagtcgggccgcgac
aagttccgctcgctggccgggctggagaccgtcaacgggggcccgccggccgacgccgcg
ggacgtcccgacttcggcaagctgaccccgctgttcccggacgagcggctgcgcctcgac
accggccccctcgccacccgggtgatcgacctcgtcgcgccgatcggcaagggccagcgc
ggcctgatcgtgtcgccgccgaaggtcggcaagacgatgatgctgcaggccctcgcgaac
ggcatcgcgcgcggcaaccccgaggcgcacctgatggtggtgctgatcgacgagcgtccc
gaggaggtcaccgacctgcagcggacggtcgagggcgaggtgctgcactcgacgttcgac
cggcccgcgcaggaccacaccgcgctcgccgaactggccgtcgagcgcgcgaagcggctc
gtcgagcaggggcacgacgtcgtcatgctgctcgactcgatcacccggctcggccgcgcc
tacaacctggccgcgccgtccagcagccgcatcctggcgggcggcgtcgcgaccaccgcg
atctacccgccgaagaagttcttcggggccgcccgcaacatcgaggagggcgggtccctc
accatcctcgcgaccgcgctcgtggagaccgggtcgcgcatggacgacgtcctgttcgag
gagtacaagggcaccggaaacatggagctgaagctcgaccggggcctggccgaccggcgg
atcttcccggccgtggacgtcgaggcgtccggcacccgccgcgacgagctgctcatgtcg
ccgcaggagctcgagctgacgtggcggctgcgccgcgcgctctccggcctcgaccggcag
ggggccgtcgagcacctcctggagaagatgaagggcacctcgtcgaacgcggagttcctg
ctccgcctccagcagacgctctga
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