Actinomadura sp. WMMB 499: F7P10_24925
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Entry
F7P10_24925 CDS
T06213
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
actw
Actinomadura sp. WMMB 499
Pathway
actw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
actw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
F7P10_24925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
actw03021
]
F7P10_24925
03400 DNA repair and recombination proteins [BR:
actw03400
]
F7P10_24925
Enzymes [BR:
actw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
F7P10_24925
Transcription machinery [BR:
actw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
F7P10_24925
DNA repair and recombination proteins [BR:
actw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
F7P10_24925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
SocA_Panacea
TarH
Motif
Other DBs
NCBI-ProteinID:
QFG23877
UniProt:
A0A5J6UAQ4
LinkDB
All DBs
Position
5556014..5559886
Genome browser
AA seq
1290 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYMITSVDAERRDRDLPTLEAHISVERQQIEQARDAQVEARQQKLEAD
LAELEEAGAKADQKRKIRDGAEREMKQLRDRSQREIDRLDEVWNRFKNLKVQDLEGDELL
YREMRDRFGRYFEGGMGAAAIQARLQNFDLDAEAEKLRDIIRTGKGQKKARALKRLKVVS
AFLNTRNSPLGMVLDCIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSTNNILKPSDGKPVTMPTQDMVIGLYWLTTEKDGAEGEGR
AFGTVSEAIMAYDRGELDLQAKIGIRLKDAPPPRGWTAPEGYDPSQPYRLETTLGRALFN
EALPADFPFVNAEIGKKQLSAIVNELAETYPKVTVANSLDALKSTGFHWATRSGVTIAID
DVITPPGKQDILGGYEARAEKVQREFNRGLITDDERKQELIEIWNKATADVAKNMEEAFP
KDNPIWMMIQSGARGNPLQLRQIAGMRGLVSNPKGETIPRPIKSSFREGLSVVEYFISTH
GARKGLADTALRTADSGYLTRRLVDVAQDVIVREVDCGTDRTIPFEVGERLPDGTLVKLA
TTETALVGRTIAEDVEVDGTVIFPADTDLSDSVVTRLVDAGVESVRTRSALVCEAKIGVC
AACYGRSLATGKRVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGGDITHGLPRVQEL
FEARIPKGVAPISEVAGRVKIDETEKARKVVIVPNDGSDEIAYPVPMRSRLLVKEGEGVE
VGQQLIAGAINPHEVLRILGPRAVQLHLVQEVQEVYRSQGVSIHDKHIEIIVRQMLKRVN
ILESGDTDLLPGDLVERPIFEETNRNVVAEGGQPAAGRPVLMGITKASLATESWLSAASF
QETTRVLTEAAMHAKSDPLLGLKENVIIGKLIPAGTGMPQYRNVRVEPTEEAKAAVYSVG
SYDDGAEYAFGQGSGEAVPLEEYDFGQYNR
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgacgtcaacttcttcgacgagcttcgcatcggcctggcgaccgccgacgacatc
cgccagtggtcccacggcgaggtgaagaagccggagacgatcaactaccggaccctcaag
ccggagaaggacgggctcttctgcgagaagatcttcggtccgacccgcgactgggagtgc
tactgcggtaagtacaagcgcgtccggttcaagggcatcatctgcgagcgctgcggcgtc
gaggtcactcgcgccaaggtgcggcgcgagcggatgggccacatcgagctggccgctccg
gtcacccacatctggtacttcaagggcgtcccgtcgcgcctggggtacctgctggacctg
gccccgaaggatctcgagaagatcatctacttcgcggcctacatgatcaccagcgtggac
gccgagcgccgcgaccgcgacctgccgacgctggaggcccacatctccgtggagcgccag
cagatcgagcaggcccgcgacgcgcaggtcgaggcccgccagcagaagctggaggccgac
ctggccgagctggaggaggccggcgcgaaggccgaccagaagcgcaagatccgcgacggc
gccgagcgggagatgaagcagctgcgggaccgctcgcagcgcgagatcgaccgcctcgac
gaggtgtggaaccggttcaagaacctcaaggtccaggacctcgagggcgacgagctgctc
taccgcgagatgcgcgaccggttcggccggtacttcgagggcggcatgggcgccgcggcc
atccaggcccggctgcagaacttcgacctcgacgccgaggcggagaagctgcgcgacatc
atccgcaccggcaagggccagaagaaggcccgcgccctcaagcggctgaaggtcgtgtcc
gccttcctcaacacccgcaacagcccgctcggcatggtgctggactgcatcccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggcggccggttcgccacgtccgacctg
aacgacctgtaccgccgggtgataaaccgcaacaaccgcctcaagcggctgctcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggccgcccggtcaccgggccgggcaaccgtccgctgaag
tcgctgtccgacatgctcaagggcaagcagggccggttccgccagaacctgctgggcaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgcagctgaagctgcaccag
tgcggcctgcccaagcagatggcgctggagctgttcaagccgttcgtcatgaagcggctc
gtcgacctgaaccacgcgcagaacatcaagtccgcgaagcggatggtggagcgcgcgcgc
ccggtcgtgtgggacgtcctggaagaggtcatcaccgagcacccggtgctgctgaaccgg
gcgccgaccctgcaccgcctcggcatccaggcgttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctggtctgcaccgcgttcaacgcggacttcgacggcgaccag
atggcggtgcacctgccgctgtccgccgaggcgcaggccgaggcgcggatcctgatgctg
tccacgaacaacatcctcaagccgtccgacggcaagcccgtcaccatgcccacccaggac
atggtcatcggcctgtactggctgacgacggagaaggacggcgccgagggcgagggccgc
gcgttcggcaccgtgtccgaggcgatcatggcctacgaccggggcgaactcgacctgcag
gccaagatcggcatccggctgaaggacgccccgccgcctcgcggctggacggccccggag
ggctacgacccgtcgcagccgtaccggctggagaccacgctcggccgcgcgctgttcaac
gaggcgctgcccgccgacttcccgttcgtgaacgcggagatcggcaagaagcagctctcg
gcgatcgtcaacgagctggcggagacctacccgaaggtcaccgtcgccaactcgctggac
gcgctcaagagcaccggcttccactgggcgacccggtcgggcgtcaccatcgcgatcgac
gacgtgatcaccccgcccggcaagcaggacatcctgggcggctacgaggcccgcgccgag
aaggtgcagcgcgagttcaaccgcggcctgatcaccgatgacgagcgcaagcaggagctc
atcgagatctggaacaaggccacggccgacgtcgccaagaacatggaggaggcgttcccg
aaggacaacccgatctggatgatgatccagtcgggcgcccgcggtaacccgctccagctg
cggcagatcgccggcatgcgcggcctggtgtcgaacccgaagggcgagacgatcccgcgg
ccgatcaagtcgtcgttccgcgagggcctgtcggtcgtcgagtacttcatctcgacgcac
ggcgcccgcaagggtctggccgacaccgcgctgcggaccgccgactcgggttacctgacc
cgtcgtctggtggacgtcgcgcaggacgtcatcgtccgcgaggtcgactgcggcaccgac
cgcacgatcccgttcgaggtcggcgagcggctgccggacggcacgctggtcaagctcgcc
acgaccgagaccgcgctggtcggccgcaccatcgccgaggacgtcgaggtggacggcacg
gtgatcttcccggccgacaccgacctgtcggactcggtcgtcacgcgcctggtcgacgcg
ggggtggagagcgtccgcacccgcagcgccctggtctgcgaggcgaagatcggtgtctgc
gccgcctgctacggccgctcgctggccaccggcaagcgggtggacgtcggcgaggccgtc
ggcatcatcgcggcgcagtccatcggtgagcccggcacccagctgaccatgcggacgttc
cacaccggcggtgtcgccggcggcgacatcacgcacggtctgccgcgtgtccaggagctg
ttcgaggcccgcatccccaagggtgtcgccccgatcagcgaggtcgccggccgcgtcaag
atcgacgagacggagaaggcccgcaaggtcgtcatcgtcccgaacgacgggtccgacgag
atcgcctacccggtgccgatgcggtcccgcctcctggtgaaggagggcgagggcgtcgag
gtcggccagcagctcatcgcgggtgccatcaacccgcacgaggtgctgcgcatcctcggc
ccgcgcgccgtgcagctccacctggtccaggaggtccaggaggtctaccggtcgcagggc
gtgtcgatccacgacaagcacatcgagatcatcgtccgccagatgctgaagcgggtgaac
atcctcgagtcgggcgacaccgacctgctgccgggcgacctggtggagcggccgatcttc
gaggagacgaaccgcaacgtcgtcgccgagggcggccagcccgccgccggccgtcccgtc
ctgatgggcatcaccaaggcctcgctcgcgaccgagtcgtggctgtcggcggcgtccttc
caggagacgacccgggtgctcaccgaggccgcgatgcacgccaagagcgacccgctgctc
ggcctcaaggagaacgtcatcatcggtaagctcatcccggccggtaccggcatgccgcag
taccgcaacgtccgggtcgagcccaccgaggaggcgaaggccgcggtgtactccgtcggc
tcctacgacgacggcgccgagtacgccttcgggcagggctccggcgaggccgtgccgctg
gaggagtacgacttcgggcagtacaaccggtaa
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