Actinomadura sp. WMMB 499: F7P10_30415
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Entry
F7P10_30415 CDS
T06213
Symbol
rfbH
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K13328
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:
4.2.1.164
]
Organism
actw
Actinomadura sp. WMMB 499
Pathway
actw00523
Polyketide sugar unit biosynthesis
actw01100
Metabolic pathways
actw01110
Biosynthesis of secondary metabolites
actw01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
actw00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
F7P10_30415 (rfbH)
Enzymes [BR:
actw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.164 dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
F7P10_30415 (rfbH)
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GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QFG24809
UniProt:
A0A5J6UCW5
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Position
complement(6755167..6756465)
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AA seq
432 aa
AA seq
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MDDRSLILDRTRKLHRETGEREFVPGVTPILPSGAVLDENDRVALVEAALDLRIAAGPHA
RRFESAFARYFGLRKAHLVNSGSSANLLALGSLTSPRLGDLRLRPGDEVITVAAGFPTTV
NPIVQNGLVPVFVDVELGTYNTTPELVEAAVTDRTRAVMFAHALGNPFAAQEIAELASDR
DLFFVEDNCDAVGSTYKGRLTGTFGDLSTVSMYPAHHITAGEGGCVLTSNLELARVVESL
RDWGRDCWCEPGVDDTCRKRFSYQLGTLPEGYDHKYTFSHVGYNLKATDLQGALALSQLG
RIEEFGRIRRRNWRLLREGLDGVPGLILPEPAPGSDPSWFGFAITVRPDAPYSCAELTAF
LESRRIGTRRLFGGNITRHPAYRDVEHRVSGELTNCDIVTEHTFWIGVYPAITEEMAGYM
VDSIVEFAGRTR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
gtggacgacagatccctgatccttgaccgcacccgcaagctccaccgcgaaacgggcgag
cgggagttcgtgccgggggtgacgccgatcctgccctccggcgccgtcctcgacgagaac
gaccgggtcgcgctggtggaggcggcgctggacctgcggatcgccgccgggccgcacgcc
cgcaggttcgagagcgcgttcgcccggtacttcgggctccgcaaggcgcacctggtcaac
tccgggtcgtcggcgaacctgctggcgctggggtcgctgacctcgccgcggctcggcgac
ctgcggctgcggcccggcgacgaggtgatcacggtggcggcggggttccccacgaccgtc
aacccgatcgtgcagaacggcctcgtcccggtgttcgtggacgtggagctcggcacctac
aacacgacgccggaactcgtcgaggcggccgtcacggaccggacgcgggccgtcatgttc
gcgcacgcgctcggcaacccgttcgcggcgcaggagatcgccgagctggcgagcgaccgc
gacctgttcttcgtggaggacaactgcgacgcggtcggctccacctacaagggacggttg
accggcacgttcggcgacctgtcgaccgtgagcatgtatccggcgcaccacatcaccgcc
ggcgagggcggctgcgtgctcacctccaacctggagctggcgcgcgtggtcgagtcgctg
cgggactggggccgggactgctggtgcgagccgggtgtggacgacacgtgccgcaagcgg
ttctcctaccagctcggcacgctgcccgagggctacgaccacaagtacaccttctcgcac
gtcggctacaacctgaaggcgacggacctgcagggggcgctggcgctgagccagctcggc
cggatcgaggagttcgggcggatccggcggcggaactggcggctgctgcgcgaggggctc
gacggggtaccgggcctgatcctgccggagcccgcaccgggctcggacccgagctggttc
ggcttcgcgatcacggtgcggccggacgcgccctactcgtgcgcggagctgacggcgttc
ctggagtcccgcaggatcgggacgcggcggctgttcggcggcaacatcacccggcatccc
gcctaccgggacgtcgagcaccgcgtctcgggcgagctgacgaactgcgacatcgtcacc
gagcacacgttctggatcggcgtgtacccggcgatcaccgaggagatggccgggtacatg
gtcgactcgatcgtcgagttcgccggccgcacgcggtga
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