Actinomadura sp. WMMB 499: F7P10_37140
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Entry
F7P10_37140 CDS
T06213
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
actw
Actinomadura sp. WMMB 499
Pathway
actw03030
DNA replication
actw03430
Mismatch repair
actw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
actw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F7P10_37140 (dnaE)
03430 Mismatch repair
F7P10_37140 (dnaE)
03440 Homologous recombination
F7P10_37140 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actw03032
]
F7P10_37140 (dnaE)
03400 DNA repair and recombination proteins [BR:
actw03400
]
F7P10_37140 (dnaE)
Enzymes [BR:
actw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F7P10_37140 (dnaE)
DNA replication proteins [BR:
actw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F7P10_37140 (dnaE)
DNA repair and recombination proteins [BR:
actw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F7P10_37140 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QFG25940
UniProt:
A0A5J6UG48
LinkDB
All DBs
Position
8150763..8154293
Genome browser
AA seq
1176 aa
AA seq
DB search
MADSFVHLHVHTEYSMLDGAARLKQMFDEVGRQKMPAIAMTDHGNMHGAYDFHKQATAAG
VTPIIGIEAYMAPESRFHKKKVQWGEPSQKRDDVSGGGLINHMTLWARNKTGLHNLFKLS
SRAYTEGFVFKYARMDEELLAEHADGVMATTGCPSGKIQTRLRLGQFDEALKAAATFQDI
LGKDNYFLELMDHGLDIEQRVRQGLLDIGKKLNIPPVVTNDSHYTHESEATAHDALLCVQ
VGKQLADPDRFRFNGSGYYLKTADEMRGIDSSDAWLEGCRNTLMIAERVEPEGMFESHDL
MPRFPVPEGETEETWFRKEVWSGLGRRFPQGLPEKYKEQAEYEMGVILGKGYPSYFLVVA
DFIMWAKENGILVGPGRGSAAGSLVAYAMGITDLDPLPHGLIFERFLNPERASMPDIDID
FPEDRRAEVIKYTTEKWGADKVSFIATFGTIKAKAAIKDAGRVLGFPYALGDRISKAFPP
AVMGKDIPLSGIFDDKHPRYGEAGELRKLYEEETDVKQIMDLAQGLEGLIRQTGVHAAGI
IMSGETITDHVPIMRRDADGAIITQFDYPTCETLGLLKMDFLGLRNLTIIDDALQGIKKN
KGVDVDLLDLPLDDQPTYDLLARGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVGALYR
PGPMGANSHTNYALRKNGQQEITPIHPELAEPLKEILDTTYGLIVYQEQVMAIAQKVAGY
TLGKADLLRRVMGKKKKAELDAQFVGFEEGMVENGFSKEAVKTLWDILVPFSDYAFNKAH
SAAYGLVSYWTGYLKANYPAEYMAALLTSVGDDKDKSALYLSECRRMGLKVLPPDVNTSE
ADFTPLGDTEIRFGLSAVRNVGTNVVDGIVAARKEKGAYTDFNDFLNKVPPIVCNKRVVE
SLIKAGGFDELRHERKALLMVHEQAIDSVIDIKRKEAIGQDSLFGALEDDGGEDAFAVVI
PEGEEWDKTTLLAFEREMLGLYVSDHPLLGVEHILEREADCTIASLNSGERPDGQIVTVA
GLLSGLQRKVTKQGNSWAMFQLEDLAGSIEVLCFPSAYQLCSTLLAEDAILIVKGKLDRR
EDVAKIIGMEVTQPDLTITDAVGPLSVSLQLNRCTPPTVARLKEVLTTHPGAAEVHLHLQ
NGPRTTVVRLDDRLRVSPSPALMGDLKQLLGPSCLG
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggccgactctttcgtccatctgcacgttcacaccgagtactccatgctggacggggcc
gcccggttgaagcagatgttcgatgaggtcgggcggcagaagatgcccgcgatcgcgatg
accgaccacggcaacatgcacggggcctacgacttccacaagcaggccaccgccgcgggc
gtcaccccgatcatcggcatcgaggcgtacatggcgccggagtcgcggttccacaagaag
aaggtccagtggggcgagccgagccagaagcgcgacgacgtgtccggcggcggcctgatc
aaccacatgacgctgtgggcgcgcaacaagaccggcctgcacaacctgttcaagctgtcc
agccgggcctacaccgagggtttcgtcttcaagtacgcccggatggacgaggagctgctc
gccgagcacgccgacggggtgatggccacgaccggctgcccgtccggcaagatccagacg
cggctgcggctcggccagttcgatgaggcgctgaaggccgccgccacgttccaggacatc
ctcggcaaggacaactacttcctggagttgatggaccacgggctcgacatcgagcagcgg
gtccggcagggcctcctcgacatcggcaagaagctgaacatcccgccggtcgtgacgaac
gactcgcactacacccacgagtccgaggcgaccgcgcacgacgcgctcctgtgcgtccag
gtgggcaagcagctcgccgaccccgaccggttccggttcaacggcagcggctactacctg
aagaccgcggacgagatgcgcggcatcgactcctcggacgcctggctggaaggctgccgc
aacacgctgatgatcgcggagcgggtcgagcccgaggggatgttcgagtcccacgacctg
atgccgcgcttccctgtccccgagggcgagaccgaggagacctggttccgcaaggaggtc
tggagcggcctcggccggcggttcccccagggcctcccggagaagtacaaggagcaggcc
gagtacgagatgggggtcatcctcggcaaggggtacccgtcgtacttcctcgtcgtcgcc
gacttcatcatgtgggccaaggagaacgggatcctggtcggccccgggcggggcagcgcc
gcgggctcgctcgtcgcgtacgcgatgggcatcaccgacctcgatccgctcccgcacggg
ctgatcttcgagcggttcctgaaccccgagcgcgcgtccatgcccgacatcgacatcgac
ttccctgaagaccggcgcgcggaggtcatcaagtacacgacggagaagtggggcgccgac
aaggtgtccttcatcgccacgttcggcaccatcaaggcgaaggccgccatcaaggacgcc
ggccgcgtcctcggcttcccctacgccctcggcgaccgcatctccaaggcgttcccgccc
gcggtcatgggcaaggacatccccctgtcgggcatcttcgacgacaagcacccccggtac
ggcgaggcgggcgagctccgcaagctgtacgaggaggagaccgacgtcaagcagatcatg
gacctggcgcagggcctggagggactgatccggcagaccggcgtgcacgccgcagggatc
atcatgtccggtgagacgatcaccgaccacgtcccgatcatgcgccgggacgccgacggc
gcgatcatcacgcagttcgactacccgacctgcgagacgctcggcctgctgaagatggac
ttcctgggcctgcggaacctgacgatcatcgacgacgccctgcaggggatcaagaagaac
aagggcgtcgacgtcgacctgctggacctgcccctcgacgaccagccgacctacgatctg
ctggcgcgcggcgacaccctcggggtgttccagttcgacggcgggccgatgcggtcgctg
ctgcggctgatgaagcccgacaacttcgaggacatctccgccgtcggcgccctgtaccgg
cccggcccgatgggcgccaactcccacaccaactacgcgctccgcaagaacggccagcag
gagatcaccccgatccaccccgagctggcggaaccgctcaaggagatcctcgacacgacc
tacggcctgatcgtctaccaggagcaggtcatggcgatcgcgcagaaggtggcggggtac
acgctcggcaaggcggacctgctccgccgcgtcatgggcaagaagaagaaggccgaactg
gacgcccagttcgtcgggttcgaggagggcatggtcgagaacggcttctccaaggaggcc
gtcaagaccctctgggacatcctcgtcccgttctccgactacgcgttcaacaaggcgcac
tccgccgcgtacggcctggtctcctactggacgggctacctcaaggccaactacccggcc
gagtacatggcggcgctgctgacgtccgtcggcgacgacaaggacaagagcgccctgtac
ctgagcgagtgccgccgcatggggctgaaggtgctgccgccggacgtcaacacctccgag
gccgacttcaccccgctcggcgacaccgagatccggttcgggctgtcggccgtccgcaac
gtcgggacgaacgtcgtcgacggcatcgtcgccgcgcggaaggagaagggcgcctacacc
gacttcaacgacttcctcaacaaggtcccgccgatcgtgtgcaacaagcgggtcgtggag
tcgctgatcaaggcgggcgggttcgacgagctgcggcacgagcgcaaggccctgctgatg
gtgcacgagcaggccatcgactcggtcatcgacatcaagcgcaaggaggccatcggccag
gactccctgttcggcgcgctggaggacgacggcggcgaggacgcgttcgccgtcgtgatc
cccgagggcgaggagtgggacaagaccaccctgctggcgttcgagcgggagatgctcggc
ctgtacgtctccgaccacccgctgctcggcgtcgagcacatcctcgagcgcgaggccgac
tgcacgatcgcgtcgctcaactcgggggagcggcccgacggccagatcgtcacggtggcg
gggctgctgtcgggcctgcagcgcaaggtcaccaagcagggcaactcgtgggcgatgttc
cagctggaggacctcgccggttccatcgaggtgctgtgcttcccctcggcctaccagctg
tgctccacgctgctggccgaggacgcgatcctgatcgtcaagggcaagctggaccgccgc
gaggacgtcgcgaagatcatcgggatggaggtcacccagcccgacctcacgatcaccgac
gcggtcggccccctctcggtgagcctgcagctcaaccgctgcaccccgccgaccgtcgcg
cgcctcaaggaggtgctgacgacgcatcccggcgccgccgaggtgcacctgcacctgcag
aacggcccccgcacgacggtcgtccggctcgacgaccggctccgcgtgtcgccgtccccg
gcgctgatgggcgacctgaagcagttgctcggcccgtcctgcctcgggtga
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