Actinomycetospora sp. NBC_00405: OG774_09440
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Entry
OG774_09440 CDS
T09735
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
acty
Actinomycetospora sp. NBC_00405
Brite
KEGG Orthology (KO) [BR:
acty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acty03016
]
OG774_09440
Enzymes [BR:
acty01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
OG774_09440
Transfer RNA biogenesis [BR:
acty03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
OG774_09440
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
WUI64665
LinkDB
All DBs
Position
1904435..1905661
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AA seq
408 aa
AA seq
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MLEPAEGVPPLIEDAAALPDAAARLAAGSGPVAVDAERASGYRYSARAYLVQLRREGAGS
FLVDPIACGGDLSVLGDALRGVEWVLHAASQDLACLAEVGMRPDSLFDTELAGRLVGYPR
VGLGPLTEHLLGVRLQKGHGAADWSRRPLPDDWLTYAALDVELLIELRDAVAADLERQDK
TVWAEQEFEAVRLAPPPPPRAEPWRRTSGMHKVRRPAQLAVVRELWESRDELAAARDVAP
GRLLPDAAIVDAALREPAGREELIAMPVFRGRAQRRLGDRWWSAIARARALDRTQWPAAA
AQPDGPPPAHRWGDKDPAAAARLAAARAALAGLSERTGTPVENLVTPDLVRRLCWSPPEL
PDAAGTADAGTVAAALADLGARPWQAELAAPLLAEALRAQPAPVDEPS
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
ctgctcgaaccggccgagggcgtacccccactcatcgaggacgccgcggcgctcccggac
gccgccgcacgtctggccgcgggcagcggccccgtcgcggtggacgccgagcgggcctcg
ggctaccgctactcggcccgcgcctacctggtgcagctgcgccgcgagggcgccggctcc
ttcctcgtcgaccccatcgcgtgcggcggcgacctctccgtgctcggcgacgccctgcgc
ggcgtcgagtgggtgctgcacgccgcctcccaggacctcgcgtgcctggccgaggtcggc
atgcgccccgactccctcttcgacaccgagctcgccgggcgcctcgtcggttatccccgc
gtcgggctcggtcccctcaccgagcacctgctgggcgtgcggctgcagaagggccacggc
gccgccgactggtcgcgccgcccgttgcccgacgactggctgacctacgccgccctcgac
gtcgagctgctgatcgagctgcgcgacgcggtggccgccgacctcgagcgccaggacaag
accgtctgggccgagcaggagttcgaggccgtgcgcctcgcccctcccccgccgccccgc
gccgagccgtggcgtcgcacctcggggatgcacaaggtgcgccggcccgcgcagctcgcc
gtcgtccgcgagctctgggagtcccgcgacgagctcgcggccgcccgcgacgtcgccccc
ggccgcctgctgccggacgccgcgatcgtcgacgccgccctgcgcgagcccgcgggccgc
gaggagctcatcgcgatgccggtgtttcgcgggcgggcccagcgccgcctgggcgatcgc
tggtggtcggcgatcgcccgcgcccgcgcgctggaccgcacgcagtggcccgcggccgcc
gcgcagcccgacggcccgccgcccgcgcaccgctggggcgacaaggacccggccgccgcc
gcgcgcctcgccgccgcccgggccgccctcgcggggctgtccgagcgcaccggcaccccg
gtggagaacctcgtgacgcccgacctcgtgcgccgtctgtgctggtcaccgcccgagctc
cccgacgctgccggcaccgccgacgccgggacggtggccgcggccctcgcggacctgggc
gcacggccctggcaggcggagctcgccgctcccctgctcgccgaggccctcagggcgcag
ccggcccctgtcgacgagccgtcctag
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