Actinomycetospora sp. NBC_00405: OG774_18465
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Entry
OG774_18465 CDS
T09735
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acty
Actinomycetospora sp. NBC_00405
Brite
KEGG Orthology (KO) [BR:
acty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acty03032
]
OG774_18465 (topA)
03400 DNA repair and recombination proteins [BR:
acty03400
]
OG774_18465 (topA)
Enzymes [BR:
acty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OG774_18465 (topA)
DNA replication proteins [BR:
acty03032
]
Prokaryotic type
DNA Topoisomerases
OG774_18465 (topA)
DNA repair and recombination proteins [BR:
acty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OG774_18465 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
SBP_bac_3
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
WUI59771
LinkDB
All DBs
Position
complement(3730172..3733177)
Genome browser
AA seq
1001 aa
AA seq
DB search
MSVAAKGSTTARSATTETVDTTEVESTGRSGARATSSTKSGGKGSGGGRKTGRGGATPAG
DGGRRLVIVESPAKARKIADYLGSRYIVESSRGHIRDLPRGAADVPAKYKGESWARLGVD
VDHDFEPLYVVSPDKKSTVSELKEALKEVDELYLATDGDREGEAIAWHLLETLKPKVPVR
RMVFHEITESAIQAAAANPRDLDQDLVDAQETRRILDRLYGYEVSPVLWKKVMPKLSAGR
VQSVATRVIVERERERMAFVSAGYWGIDAQLRATEKKDEQAPRSFKAALTSIDGARVATG
RDFDSLGQLKNSDVKRLDEGDARRLAEALADRDYTVSSVEEKPYTRKPYAPFMTSTLQQE
GGRKLRFSAERTMRTAQRLYENGYITYMRTDSTTLSETAINAARTQARDLYGDENVAEKP
RQYTRKVKNAQEAHEAIRPAGDSFRTPGQVANELSGDEFRLYELVWQRTIASQMRDARGT
TMSVRITGTAATGEECTFSASGRTITFPGFLRAYVETVDEEAGGEADDAESRLPRLAEGD
GCAAESLDPEGHSTNPPARYTEASLVKTLEERGIGRPSTYASIINTIQERGYVWKKGGAL
VPSWIAFAVIGLMEVHFGRLVDYDFTAALEDELDGIAAGTTQRETWLSHFYFGANGNGAH
GNGANGSANGHGSGVEAAMSQAGGLKKLVGDKLEGIDARQVNSLRMFADDQGRDVVVRVG
RYGPYLERTITEDGEEKSQRANLPDDLPPDELDLALAEQLFSTPQEGRSLGTDPESGHEI
LAKEGRFGPYVTETLPEGAKEKPRTGSLFKSMTLSEITLDDALKLLSLPRVVGTDPESGV
EITAQNGRYGPYIKKDKDSRSLDSEEKLFTVTLEEAQKIFAQPKQRGRAAAKPPLKELGT
DPASGEPMVVKDGRFGPYVTDGLGVNASLRKGDAVESLTDERAAELLAEKRAKDGIKPGA
KKAPAKKAPAKSATTKSAAKTTTKKAPAKKAPTKKSGTPSR
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggcagcgaagggctcgacgacggcacgcagcgcgaccaccgagaccgtcgac
accaccgaggtggagtcgacgggacggtccggcgcgcgcgcgacgtcgagcacgaagtcc
ggcggcaagggctccggcggcggccggaagacgggccgcgggggtgcgaccccggccggg
gacggcggacgccgtctggtgatcgtcgagtcgcccgcgaaggcccgcaagatcgccgac
tacctcggctcgcgatacatcgtcgagtccagccgcggccacatccgcgacctgccgcgc
ggcgccgccgacgtccccgccaagtacaagggcgagtcgtgggcccgcctgggcgtggac
gttgaccacgacttcgagcccctctacgtggtctccccggacaagaagtccacggtctcc
gagctcaaggaggccctcaaggaggtcgacgagctctacctcgcgacggacggcgaccgc
gagggcgaggccatcgcctggcacctcctcgagacgctcaagccgaaggtcccggtccgc
cggatggtgttccacgagatcaccgagtcggccatccaggccgccgccgcgaacccgcgc
gacctcgaccaggacctcgtcgacgcgcaggagacccgccgcatcctcgaccggctctac
ggctacgaggtcagccccgtgctgtggaagaaggtcatgccgaagctctcggcgggccgc
gtgcagtcggtggccacccgcgtcatcgtcgagcgcgagcgagagcgcatggcgttcgtg
tccgccggctactggggcatcgacgcgcagctgcgggcgaccgagaagaaggacgagcag
gccccgcgcagcttcaaggccgcgctgacgtcgatcgacggtgcccgcgtggccaccggc
cgtgacttcgactcgctcgggcagctcaagaacagcgacgtcaagcggctcgacgagggc
gacgcccgccggctcgcggaggccctcgccgaccgcgactacacggtctcgtcggtcgag
gagaagccctacacgcgcaagccctacgcgccgttcatgacgtccacgctccagcaggag
ggtggccgcaagctgcggttctcggccgagcggacgatgcgcaccgcgcagcggctgtac
gagaacggctacatcacctacatgcgtacggactccacgacgctgtcggagaccgcgatc
aacgccgcgcgtacccaggcccgcgacctctacggcgacgagaacgtcgcggagaagccg
cgccagtacacgcgcaaggtgaagaacgcgcaggaggcgcacgaggcgatccgtcccgcc
ggggactccttccggacccccgggcaggtcgcgaacgagctctccggcgacgagttccgg
ctctacgagctggtctggcagcgcaccatcgcgagccagatgcgcgacgcccgcggtacg
acgatgagcgtgcggatcaccggcaccgccgccaccggcgaggagtgcaccttctccgcg
tccgggcgcaccatcacgttccccggcttcctgcgcgcctacgtcgagaccgtcgacgag
gaggccggcggcgaggccgacgacgccgagagccggctgccgcgcctggccgagggcgac
ggctgcgccgcggagtcgctggaccccgagggccacagcaccaacccgcccgcgcgctac
accgaggcgagcctggtcaagacgctcgaggagcgcggcatcggccgcccctcgacctac
gcgtcgatcatcaacacgatccaggagcgcggatacgtctggaagaagggcggcgccctc
gtcccgagctggatcgccttcgcggtcatcgggctgatggaggtccacttcggccgcctg
gtcgactacgacttcaccgccgcgctcgaggacgagctggacggcatcgccgcgggcacc
acccagcgcgagacgtggctgtcgcacttctacttcggcgccaacggcaacggcgcccac
ggcaacggcgccaacggcagcgcgaacgggcacggcagcggcgtcgaggccgcgatgtcg
caggccggcggcctgaagaagctcgtgggcgacaagctcgagggcatcgacgcgcgccag
gtcaactcgctgcgcatgttcgccgacgaccagggccgcgacgtcgtcgtgcgcgtcggt
cgctacgggccctacctcgagcggacgatcaccgaggacggtgaggagaagtcgcagcgg
gcgaacctgcccgacgacctcccgcccgacgagctcgacctcgcgctcgccgagcagctg
ttctcgaccccgcaggagggccgctcgctgggcaccgacccggagtcgggccacgagatc
ctggcgaaggagggccgcttcggtccctacgtcacggagaccctgcccgagggcgccaag
gagaagccgcgcaccggctcgctcttcaagtcgatgacgctctcggagatcacgctcgac
gacgcgctgaagctgctgagcctgccgcgggtggtcggcaccgacccggagtccggcgtc
gagatcaccgcgcagaacgggcgctacgggccgtacatcaagaaggacaaggactcccgc
tcgctcgacagcgaggagaagctcttcacggtcaccctcgaggaggcccagaagatcttc
gcgcagccgaagcagcgtggccgggccgccgccaagccgccgctcaaggagctcggcacg
gacccggcctcgggcgagccgatggtggtcaaggacggtcgcttcgggccgtacgtcacc
gacggcctcggggtgaacgcctcgctacgcaagggcgacgcggtcgagtcgctgaccgac
gagcgggccgcggagctgctcgccgagaagcgcgccaaggacgggatcaagccgggcgcc
aagaaggcgccggcgaagaaggccccggccaagtcggccacgaccaagtcagcggccaag
accacgacaaagaaggcgcccgccaagaaggcgccgacgaagaagagcggcacgccgagc
cgctga
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