Actinomycetospora sp. NBC_00405: OG774_24580
Help
Entry
OG774_24580 CDS
T09735
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
acty
Actinomycetospora sp. NBC_00405
Pathway
acty03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acty00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OG774_24580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acty03021
]
OG774_24580
03400 DNA repair and recombination proteins [BR:
acty03400
]
OG774_24580
Enzymes [BR:
acty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OG774_24580
Transcription machinery [BR:
acty03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OG774_24580
DNA repair and recombination proteins [BR:
acty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OG774_24580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
5_nucleotid
Motif
Other DBs
NCBI-ProteinID:
WUI60877
LinkDB
All DBs
Position
4954225..4958136
Genome browser
AA seq
1303 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSFGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITDVNKDQRHADQSTLENEISGERKRLETQRDNDLEARAQKLESD
IAELEAEGAKSDVRRKVKEGGEREMRQLRDRAQREIDRLDEVWTTFVKLDRAQLISDETL
YRELYDRYADYFTGAMGAEAIQKLLETFDIDAEADNLRETIRSGKGQRKLRALKRLKVVA
AFQATGNRPGGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
GQVWDVLEEVINEHPVMLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSANNILSPASGKPLAMPRLDMVTGLYYLTQRREGTAGEGR
AYSSVAEAIMAFDLGSLDLQAPIKIRLVGSVVPGPGMTNGSYEPGRPWLADTTLGRVLFN
ELLPEDYPFVNEQLPKKKQAAIINDLAERYSMTEVAMTLDRLKDAGFHWATRSGVTIAID
DVVVPPRKQEILDEYELRAEQVNKRYQRGALSYQERNDEMVRIWGQATEEVAKAMEDNFP
ADNSISRIVASGAAGNMTQVRQLAGMKGLVANPKGEFIPRPIKSNFREGFSVVEYFISTH
GTRKGLADTALRTADSGYLTRRLVDVSQDVIVREVDCGTERGIPMPIGEEGPDGTLVRDI
HVDTSVYTRTAASAVTDADGNVLLDRGADIGQQAIDALLGSGVGKVRVRSVLTCDSAQGV
CARCYGRSLATGKLVDVGEAVGIVAAQSIGEPGTQLTMRTFHTGGVAGEDITTGLPRVQE
LFEARVPKGKAPIADVDGRIQLEDGDKFWKITLIPDDGSEEVVYDKLSKRMRLATVPVDG
SERPLQDGDHVGVGQQLLEGTADPHEVLRVMGPREVQLHLVDQVQKVYRSQGVSIHDKHI
EVIVRQMLRRVTIIDSGATEFLPGGVVDRAEFEAANRKVVSEGGDPAAARPVLMGITKAS
LATESWLSAASFQETTRILTNAAIEGKSDSLVGLKENVIIGKLIPAGTGINRYRNIQVQP
TEEARAAAYALPSYDDGYYAPDVFGSGSGAAVPLDDYDFGQFR
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgtcaacttcttcgacgagctgcggatcggtctggccaccgccgacgacatc
cgccagtggtccttcggcgaggtcaagaagcccgagaccatcaattaccgcacgctcaag
cccgagaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgacccgggccaaggtgcgccgtgagcgcatgggccacatcgagctggccgcgccg
gtcacgcacatctggtacttcaagggcgtcccatcgcgcctgggctacctgctcgacctg
gcgcccaaggacctcgagaagatcatctacttcgcggcgtacgtgatcacggacgtcaac
aaggaccagcgtcacgcggaccagtcgacgctggagaacgagatctccggggagcgcaag
cgcctcgagacccagcgcgacaacgacctcgaggcccgcgcgcagaagctcgagagcgac
atcgccgagctcgaggccgagggcgcgaagtccgacgtgcggcgcaaggtcaaggagggc
ggcgagcgcgagatgcgccagctgcgcgaccgtgcgcagcgcgagatcgaccgcctcgac
gaggtctggaccacgttcgtcaagctcgaccgggcccagctgatctcggacgagacgctc
taccgcgagctctacgaccgctacgcggactacttcaccggcgccatgggtgccgaggcg
atccagaagctcctggagaccttcgacatcgacgccgaggccgacaacctccgcgagacc
atccgctcgggcaagggccagcgcaagctgcgcgcgctcaagcggctcaaggtcgtcgcg
gcgttccaggccaccgggaaccgtcccggcggcatggtgcttgactgcgtcccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggtggccgcttcgcgacgtcggacctc
aacgacctgtaccgccgggtcatcaaccgcaacaaccgcctcaagcgactgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgtggccggccggtgaccgggccgggcaaccgcccgctcaag
tcgctgtccgacctgctcaagggcaagcagggccggttccgtcagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggcctgcccaagcagatggcgctcgagctgttcaagccgttcgtcatgaagcggctg
gtcgacctcaaccacgcgcagaacatcaagtccgcgaagcgcatggtcgagcgtcagcgc
ggccaggtctgggacgtgctcgaggaggtcatcaacgagcacccggtgatgctgaaccgg
gcgcccacgctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gcgatccagctgcacccgctggtctgcgaggcgttcaacgccgacttcgacggtgaccag
atggcggtccacctgccgctgtccgccgaggcgcaggccgaggcccgcatcctcatgctg
tcggcgaacaacatcctgtcgccggcgtccggcaagccgctggccatgccgcgcctcgac
atggtgaccggcctgtactacctcacccagcgccgcgagggcacggccggcgagggccgg
gcgtactcgtcggtggccgaggcgatcatggcgttcgacctggggtcgctcgacctccag
gcgccgatcaagattcgcctcgtgggctcggtcgtgcccggtccggggatgacgaacggc
tcctacgagcccggtcgcccgtggctggccgacacgacgctcggccgggtgctcttcaac
gagctgctgccggaggactaccccttcgtcaacgagcagctgccgaagaagaagcaggcg
gcgatcatcaacgacctcgccgagcggtactcgatgaccgaggtcgcgatgaccctggac
cggctcaaggacgccggcttccactgggccacgcgctcgggcgtcaccatcgccatcgac
gacgtcgtcgtgccccctcgcaagcaggagatcctcgacgagtacgagctccgtgcggag
caggtcaacaagcgctaccagcgcggtgcgctctcctaccaggagcgcaacgacgagatg
gtgcgcatctggggtcaggccaccgaggaggtggcgaaggcgatggaggacaacttcccc
gccgacaactccatctcccggatcgtcgcctcgggcgcggccggcaacatgacccaggtc
cgccagctggcgggcatgaagggtctggtcgcgaaccccaagggcgagttcatcccgcgc
ccgatcaagtcgaacttccgtgagggcttctcggtcgtcgagtacttcatctcgacgcac
ggcacccgcaagggtctggccgacaccgccctgcggaccgccgactcgggctacctgacc
cggcgcctggtcgacgtctcgcaggacgtcatcgtccgcgaggtcgactgcggcaccgag
cgcggcatcccgatgccgatcggcgaggagggcccggacgggaccctggtgcgcgacatc
cacgtcgacaccagcgtctacacccggaccgcggcctcggccgtcaccgacgccgacggc
aacgtgctgctcgaccgcggtgccgacatcggccagcaggcgatcgacgccctcctgggc
tcgggcgtcggcaaggtccgtgtccgcagcgtcctgacctgcgactcggcccagggtgtc
tgcgcccgctgctacggccgctcgctggccaccggcaagctcgtcgacgtgggcgaggcg
gtcggcatcgtcgccgcccagtccatcggtgagcccggcacgcagctgacgatgcgcacc
ttccacaccggtggcgtcgcgggtgaggacatcaccacgggtctgccgcgtgtgcaggag
ctcttcgaggcccgcgtcccgaagggcaaggcgccgatcgccgacgtcgacggccgcatc
cagctcgaggacggcgacaagttctggaagatcaccctcatcccggacgacgggagcgag
gaggtcgtctacgacaagctgtccaagcgcatgcggctcgccacggtgccggtcgacggc
tccgagcgtccgctgcaggacggcgaccacgtgggcgtcggtcagcagctgctcgagggc
acggccgacccgcacgaggtgctgcgcgtgatgggcccccgcgaggtgcagctgcacctc
gtcgaccaggtgcagaaggtgtaccggtcgcagggtgtgtcgatccacgacaagcacatc
gaggtcatcgtccggcagatgctgcgccgggtgacgatcatcgactcgggcgccaccgag
ttcctgcccggtggtgtcgtcgaccgcgccgagttcgaggcggccaaccgcaaggtggtc
tccgagggcggcgacccggcggcggcccgcccggtgctcatgggcatcacgaaggcctcg
ctggccaccgagtcgtggctgtccgccgcctccttccaggagacgacgcgcatcctcacg
aacgcggccatcgaggggaagtccgacagcctggtcgggctgaaggagaacgtgatcatc
ggaaagctgatcccggccggcaccggcatcaaccggtaccggaacatccaggtccagccg
accgaggaggcccgagcggccgcctacgccctgccgagctacgacgacgggtactacgcc
cccgacgtgttcggctcgggcagcggcgccgccgtgccgctcgacgactacgacttcggc
cagttcaggtga
DBGET
integrated database retrieval system
