Actinomyces sp. 432: CWT12_05910
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Entry
CWT12_05910 CDS
T06433
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
actz
Actinomyces sp. 432
Pathway
actz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
actz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CWT12_05910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
actz03019
]
CWT12_05910
03009 Ribosome biogenesis [BR:
actz03009
]
CWT12_05910
Enzymes [BR:
actz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CWT12_05910
Messenger RNA biogenesis [BR:
actz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CWT12_05910
Ribosome biogenesis [BR:
actz03009
]
Prokaryotic type
rRNA helicases
CWT12_05910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
CMS1
ResIII
Cas3-like_C_2
adh_short
Motif
Other DBs
NCBI-ProteinID:
QHO90951
LinkDB
All DBs
Position
1454813..1457275
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AA seq
820 aa
AA seq
DB search
MTSTPTGPSAPFGTPDEAPLGIDDLFSAQIGGAPVSTSPSDVSAAPSPASPEGAASDEHA
DTVAAPADADSGPAFVSPPSADSFDTPASSDSPEDPEGLEDEHEEDDVDLNLPENDPEYP
ETDSDPGQDEYDDLAAGDAPEDGAGAEDADVEEDDDAAQTREDQEDTEASAEAPAEVTFD
ALGLPADLLKAVKDMGFEVPTPIQREAIPVLLSGRDVVGIAQTGTGKTAAFGLPLLDAVD
ARDGAVQALVLAPTRELALQSAEAITDMASRSRGLDVVAVYGGAPYGPQIGALRDGAQVV
VGTPGRIIDLIEKGALSLDEVKYFVLDEADEMLRMGFAEDVETIAATIPAERRTALFSAT
MPPAIQEVARQHLDNPVRVEVARQASTVDTVHQTYAVVPFRHKIGAAARVLAVTDAEAAL
VFVRTKSTAEDVAIELAGRGIQAAAISGDVPQRERERLVERLRAGTLDVLVATDVAARGL
DVDRIGLVVNFDVPREAEAYVHRIGRTGRAGRHGEAVTFLTPKEKGKLRQIERLTGTRLE
EVTLPSPADVSAHRAGKLLERAAARYERGRLEMYTELVAAKSEELGVDADELAATLLALA
VGDEGPRRRRDGERPRRGSREELLDEDGSFVSASFEGGRDDRRGRRGDRIDGKPGAGRGG
RRRHEDGSGTVYRIEVGHRDRVLPGAIVGALANEGSISGSDIGKIDIMQSFSLVEIHTPL
SQEQLENMRHATFAGRELRIRVDEGPGHGWDGPRGGRSGGGYRGGRNNDRGSGRYDRGGF
KRRYDRDDRRNDRNDRSGRWDNRGWDGRRKGGFRGNRDGR
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgacatctaccccgactgggccctctgcgcccttcggcacccccgatgaggcccccctg
ggcatcgacgacctgttcagcgcgcagatcggcggcgcgcctgtaagcacatcaccctct
gacgtctccgccgcaccgagcccggcgagcccggagggcgctgcctcggacgagcatgcg
gacaccgtcgccgctcctgccgatgccgactccggccccgccttcgtttcgcccccgtcg
gcggattcctttgacactccggcgtcctccgactcccctgaggatccggagggcctcgag
gacgagcacgaggaggacgacgtcgacctgaaccttccggagaacgaccccgagtacccc
gagaccgactcggaccccgggcaggacgagtatgacgacctcgccgccggtgatgcccca
gaggacggggccggcgccgaagacgcggacgtcgaggaagatgacgacgcggcacagacg
cgggaggatcaggaggatacggaggcctccgcggaggctcccgcagaggtaaccttcgat
gctcttgggcttccggccgacctgctgaaggcggtaaaggacatgggcttcgaggttccg
accccgattcagcgtgaggccatccccgtactgctgtccggacgcgacgtcgtgggcatc
gcccagacgggaacaggcaagaccgctgccttcggactgccgctgctggacgccgtcgac
gcccgcgacggcgcggtacaggccctggtgctggcgccgactcgtgagttggcgctgcag
agcgccgaggccatcaccgacatggcgtcccgctcacgcggactcgacgtcgtcgccgta
tacggcggcgcgccctacgggccgcagatcggggcgctcagggacggcgcccaggtggtc
gtgggcacccccggacgcatcatcgacctgatcgagaagggcgctctgagcctggatgag
gtgaagtacttcgtcctggatgaggccgacgagatgctgcgcatgggattcgccgaggac
gtggagacgatcgccgccaccattccggccgagcgccgcaccgccctgttctccgccacc
atgccgcccgccattcaggaggtcgcccgccagcacctggacaacccggtgcgtgtggag
gtagcccgtcaggcctccaccgtggacaccgtccaccagacctacgcggtggtgcccttc
cgccacaagatcggggcggccgcgcgcgtgctggcggttaccgacgctgaagccgccctg
gtgttcgtgcgcaccaagtccaccgccgaggacgtggccatcgagcttgccggccgcggc
attcaggcggccgcgatctccggcgacgtgcctcagcgcgagcgcgagcggctggtcgag
cggctgcgcgccggcaccctcgacgtactggtcgccaccgacgttgccgcccgcggcctg
gacgtggaccgcatcggcctggttgtcaactttgacgtgccccgcgaggcggaggcctac
gtgcaccgcatcggccgcaccggccgcgcgggtcgccacggcgaggccgtcaccttcctg
accccgaaggagaagggcaagctccgccagatcgagcgcctgaccggcacccggctggag
gaggtcaccctcccctcccccgccgacgtttcggcgcaccgcgccggcaagctgcttgag
cgggccgcagcccggtacgagcgcgggcgcctggagatgtacaccgagctggtagccgcc
aagagcgaggagctgggggtggacgccgacgagctcgccgctactttgctggcgctggcg
gttggtgacgagggcccgcgccgacgccgcgatggggagcggccgcggcgcggcagccgt
gaggagctcctggatgaggacggctccttcgtgtcagcgtccttcgagggcggccgcgac
gaccgtcgcgggcgccgcggagaccgcatcgacggcaagccgggtgccggtcgcggcggg
cgtcgacgtcatgaggacggctcaggcaccgtgtaccgcattgaggtcggacaccgagac
cgggtgctgccgggggcgatcgtcggcgccctggccaatgagggctctatctccgggtcg
gatatcggcaagatcgacatcatgcagtccttctccctggtggagatccacacgccgctg
agccaggagcagctggagaacatgcgccacgccaccttcgccggccgggagctgcgtatt
cgtgtggacgaggggcccgggcacggctgggatggtccgcggggtggtcgctccggtggc
gggtaccggggcggacggaacaatgaccgcggttccggacgttatgaccgcggcggcttc
aagcggcgctacgaccgtgatgaccgccgcaacgacaggaatgacaggagcgggcgctgg
gacaaccgcggttgggacggccgccgcaagggaggcttccgcggtaatcgcgacgggcgg
tga
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