Actinomyces sp. 432: CWT12_08535
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Entry
CWT12_08535 CDS
T06433
Name
(GenBank) RNase J family beta-CASP ribonuclease
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
actz
Actinomyces sp. 432
Pathway
actz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
actz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CWT12_08535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
actz03019
]
CWT12_08535
Messenger RNA biogenesis [BR:
actz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CWT12_08535
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QHO92272
LinkDB
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Position
complement(2053444..2055078)
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AA seq
544 aa
AA seq
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MRIVPLGGLGEVGRNMTVFEVGGKLLIVDCGVLFPEEDQPGVDLILPDFTYIEDRLDDVV
AMVLTHGHEDHIGGVPYLLRLREDIPLVGSDLTLAFVSAKLSEHRLHPVLRVVEEHERVS
YGPFDLEFVAVNHSIPDAMAAMIRTEAGSVLITGDFKIDSLPIDGRITDLRSFARFGDEG
VDLFCVDSTNAEVPGMIGHENQIGPVLDGVFAESDQQIIVASFASHVHRVQQVLDAAALH
GRRVALIGRSMVRNMGIAAERGYLNVPEGVLINARDLASLPPDERVLMVTGSQGEPMAAL
SRMAHGEHRSVTVEPGDTVIFASSLIPGNENSVNRVINRLMRLGARVVHQGNAKVHVSGH
ASSEELLHVYNIVGPRNVMPIHGEIRHLVANGALAVKTGVDPKRVMLCEDGVVVDLADGK
ARIAGSVPCGYVYVDGSSIGEIDESELKDRRILAEEGFVSVYAVVETSTGTILAGPDIQA
RGVAEDPAVFDEVLPDVTNALADALDKGNADAHSLQQAMRRTLGRWIGRRLRRRPMIVPV
VIEA
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgtcccactgggcggactcggcgaggtcgggcgcaacatgacggttttcgag
gtcggcggcaagctgctcatcgtcgactgcggcgtgctgttccccgaggaggatcagccc
ggtgtcgacctcatcctgccggacttcacctacattgaggaccgcctcgacgacgtcgtc
gcgatggtgctgacccacgggcatgaggaccacatcggcggtgtgccctacctgctgcgg
ctaagggaggacatccccctggtcggctcggacctgaccctggccttcgtctccgccaag
ctctccgagcaccgcctgcacccggtgctgcgcgtagtggaggagcacgaacgggtcagc
tacggcccgttcgaccttgaattcgtggcggtgaaccactccatccccgacgccatggcc
gccatgatccgcacggaggcgggctcggtgctgatcaccggggacttcaagatcgactcc
ctgcccatcgacgggcgcatcacggatctgcgctccttcgcccgtttcggcgatgagggc
gtggacctgttctgcgtggactccaccaacgccgaggtccccggcatgatcgggcatgag
aatcagatcggcccggtcctggacggtgtcttcgccgagtccgaccagcagatcatcgtg
gcttccttcgccagccacgtccaccgggtgcagcaggtgctggacgcggctgccctgcac
ggccgccgcgtggccctgatcggccgctccatggtgcgcaatatggggatcgctgccgaa
cgtggctacctgaacgttccagagggggtgctcatcaacgcccgcgacctggcgtcgctg
cccccggacgagcgggtgctgatggtcaccggttcccagggcgagcccatggcggccctg
tcccgcatggcgcacggcgagcaccgctcggtgacggtggagcccggagacacggtcatc
tttgcctcctccctgattcctggcaatgagaactccgtcaaccgggttatcaaccggctc
atgcgcctgggggcccgggtggtccaccagggcaatgccaaggtgcacgtctccggccac
gcctcctccgaggagctgctgcacgtgtacaacatcgtcggcccccgcaacgtcatgccg
atccacggcgagatccgccacctggtggccaatggcgccctggcggtcaagaccggcgtc
gaccccaagcgggtgatgctgtgcgaggacggggtggtggttgacctggccgacggcaag
gcccgcatcgccggctccgtgccctgcggctacgtttacgtggacggctcctcaatcggc
gagatcgacgagtcagagctgaaggaccggcgcatcctcgccgaggagggcttcgtgtcc
gtctacgccgtggtagagacctcgaccggcaccatcttggccgggccggacattcaggcc
cgcggcgtcgccgaggacccggctgtattcgacgaggtcctgccggacgtcaccaacgcc
ttggccgatgcgctggacaagggcaatgccgatgcccactccctccagcaggccatgcgc
cgcacgctgggccggtggatcggtcggcgcctgcggcggcggcccatgatcgttcccgtg
gtaatcgaagcatga
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