Acidithiobacillus caldus SM-1: Atc_0004
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Entry
Atc_0004 CDS
T01581
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
acu
Acidithiobacillus caldus SM-1
Brite
KEGG Orthology (KO) [BR:
acu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acu03032
]
Atc_0004
03400 DNA repair and recombination proteins [BR:
acu03400
]
Atc_0004
Enzymes [BR:
acu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Atc_0004
DNA replication proteins [BR:
acu03032
]
Prokaryotic type
DNA Topoisomerases
Atc_0004
DNA repair and recombination proteins [BR:
acu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Atc_0004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AEK56655
UniProt:
F9ZT39
LinkDB
All DBs
Position
3770..6175
Genome browser
AA seq
801 aa
AA seq
DB search
MTEKYDSTSIQVLRGLEAVRKRPGMYIGDTDDGSGLHHMVFEVVDNAIDEALAGYCDRIL
VTIHEDESVSVRDNGRGIPVDIHAEEGRSAAEVILTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEYLHLQIDRDGYRWTQEYRDGEPLAPLQRGEASRKRGTEIRFKPSAQVFADTH
FHFEILARRLRELAFLNSGVHIQLRDERGEGREEVFHYEGGIRAFVEHLNRSKNAIHPTV
ISLSGARDGVMVEAALQWNEGYNESVLCFTNNIPQADGGTHLAGFRAALTRTLNQYMERE
GILAKAKVAVSGDDAREGLTAVLSVKVPDPKFSSQTKEKLVSSEVKPIVEASMAEALGIF
LDEHPREAQAIAAKVVEAARAREAARRARELTRRKGALDIANLPGKLADCQEKDPAKCEI
YLVEGDSAGGSAKQGRDRRHQAILPLKGKILNVERARFDKMLSSDEIGTLITALGTGIGQ
EDFDVTKLRYHRVIIMTDADVDGSHIRTLLLTFFYRQMPELVARGHVYIAQPPLYKVKKG
KDERYIKDDQELATYLRELAVQDARFETAAGGEIVSDEHLAALIRQYQGVEAVIERLARR
YPTALLWALATVAPPASAMDAGAPWQDFAARLENILQGDALAGEHYRVQIVGGDESPRLH
IERRLHGSQEQRFLDADFFVSADYRHLRNYAEQVESRVGDGARIHRGDKSSELRHFRQGM
QWLLAQARQGVEIQRYKGLGEMNPEQLWETTMNADNRRLVRVDVEDAIAADEVFSMLMGD
AVEPRRRFIEENARFVSRLDV
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaaatacgactcgaccagcattcaggtgttgcgcggcctcgaagccgtgcgt
aaacgtcccggcatgtacatcggtgataccgacgatggcagcggcctgcaccacatggtt
ttcgaggtggtggacaacgccatcgatgaagccttggccggctattgcgatcgcatcctg
gtcaccatccacgaggacgagtccgtcagcgtacgcgacaatggacgcggcataccggta
gatattcatgccgaagagggtcgctcggcggcggaggtgatcctcaccgtactccacgcc
ggcggcaaattcgacgacaactcgtacaaggtttcgggtggtctgcacggagtcggtgtc
tccgtggtcaacgctttgtcggagtacctgcatctgcagatcgatcgcgatggctaccgt
tggacccaggaataccgcgatggtgagcctttggcgcccctgcagcgaggcgaggcgtcg
cgtaagcgcggcacggaaatccgcttcaagccatcggcacaggtctttgccgacacccat
ttccacttcgagatcctggcccgacgcctacgcgagctcgcctttctcaactccggtgtg
cacattcagttgcgcgacgagcgcggagaggggcgcgaagaagtctttcactacgaaggt
ggtatccgtgccttcgtggagcatctcaaccgcagcaagaacgccattcaccccaccgtc
atcagtctgtcgggggcgcgcgacggggtgatggtggaagccgcactgcagtggaacgag
ggttacaacgagagtgtgctctgtttcaccaacaatatcccgcaggcggacgggggcacc
cacctggccgggtttcgggcggccctgacccgcaccctgaaccagtacatggagcgcgag
ggaattctcgccaaggccaaggtggcggtctcgggagacgacgcccgggaaggtttgacg
gcggtcttgtccgtcaaggtaccggatcccaagttttcctcccagaccaaggagaaactg
gtctccagcgaggtgaagcctatcgtcgaggcctccatggccgaggccctcggtattttt
ctggatgaacacccgcgcgaggctcaggccattgccgccaaggtggtggaggcggcgcgc
gcccgggaagcggcgcggcgcgcgcgggaattgacccggcgcaagggcgctctggacatt
gccaacctgccggggaaactggccgactgccaggaaaaggatcccgccaagtgcgagatc
tatctcgtggagggagactcggccggaggctccgccaagcagggacgcgaccgccgccac
caggccatcctgcccctgaagggcaagattctcaacgtcgagcgagcgcgtttcgacaag
atgctgtcctcggacgagatcggcaccctgatcacggccctgggaacgggcatcggtcag
gaggacttcgacgtgaccaagttgcgctaccatcgagtgatcatcatgaccgatgccgac
gtcgacggcagccacatccgcaccctgctgctcaccttcttttaccgacagatgccggag
ctggtggcgcgcggccatgtctacatcgcccagccgccgctgtacaaggtcaaaaaaggc
aaggacgagcgctatatcaaggacgatcaggagctggctacctaccttcgggaactggca
gtgcaggatgcgcgcttcgagactgcggcgggcggagagatcgtcagcgacgagcacctt
gccgccctgatccgccaataccagggtgtcgaggcggtgatcgagcggctcgctcgccgc
tacccgaccgccctgctctgggcgctggcaaccgttgcaccgccggcctcggccatggac
gctggcgccccatggcaggattttgcggcgcgcctcgagaacatcctgcaaggggatgcc
cttgccggcgaacactaccgggtgcagatcgtcggcggtgacgaaagtccgcgtctgcac
atcgaaaggcgcctgcacggcagtcaggagcagcgtttcctcgatgccgatttttttgtc
agcgccgactatcgtcatctgcgcaattatgccgaacaggtggaaagccgggttggcgac
ggggcacgtattcaccgcggcgacaaatccagcgagctgcgccattttcgccagggtatg
caatggttgctggcacaggcgcgccaaggagtcgagattcagcgctataagggtctgggc
gagatgaatccggaacagctctgggagaccaccatgaacgccgataaccggcgtctggtg
cgggtggatgtggaggatgccatcgccgccgacgaggtcttttccatgctcatgggcgat
gccgtggaaccgcgccgccgtttcatcgaggagaatgcgcgcttcgtatcgcgcctggac
gtttga
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