Acidithiobacillus caldus SM-1: Atc_0232
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Entry
Atc_0232 CDS
T01581
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)
Organism
acu
Acidithiobacillus caldus SM-1
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
PAS_9
GGDEF
PAS
PAS_3
PAS_4
PAS_8
GAF_2
PAS_7
Motif
Other DBs
NCBI-ProteinID:
AEK56883
UniProt:
F9ZQB1
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Position
241842..244583
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AA seq
913 aa
AA seq
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MLLDGEGVLRLFAAPSVPEAARERLDGLRPGPESGSCGNAVLRNDSVFVSQTLRDPRWAG
LRDLAEEFTLLACWSTPIRNSYGNVLGTFALSSFTERAPNREQVRLLESIAAVIADVLFQ
EERDGRDRCFAAALRAIDEGVVLTDAEQRVVYANPAFLRLSGYELADILGKNCRFLQGPD
TDPATRQSLHDALAEGRVFHGDILNYRRDGTPFWNALNISPVRDAQGHITHFVSVQRDVT
LSRRTEQELRLSAQAFETQEGILITDAQRRIVKVNQAFTRVTGYTLEEVRGLTPAILQSG
NQDTDFYETMWREIEREGAWQGEIWNRRKNGEVYPEFLSITAVQDGNGQVSHYIGHFFDI
SHHKAREATLERLARHDPLTGLLNRRALDEELLRAQRRADAQERLLAVVMLDLDDFKPIN
DRYGHDQGDALLVLVAQRLRDHLRRSDAIARLGGDEFVLMLEGRRKLDELEPILDKLQRA
LCQPYRLRDGVEVQIGVSMGVSIYPFSAQGNLDELLREADQALFAAKQQKGQRLRPWSFW
EPPQSARRLYPLRERFRAQGVEAWFQPVWDQQSGRVVGIEALARLLGDDGSVLAPGEFLP
QLQETDIFDLTNQILEQSLTALTALEDLDPELWVSVNLDPQLIGITCLKCVQQMLQGQRI
APQRIVFELLESGDFLDRRLAQDHLLDLKAIGVGLALDDIGSGYSSLLRLKELPIDKIKL
DQSFVRGLEERPGDLHFVEALLELSSSLNVELVAEGVETAAIRDAVAVAGVRYLQGYAIA
RPMPLDALRTFLISGCEPLRQSGPRSLLGIYAEQMSEHAVLRKALRQSWTILDLPSLRDP
QNCPTYRDICRLPDADAQRILAVYRDYHEAIAAFADTDARHWMQRVAELERQHRRLSDAL
LDAIRTASATSSQ
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggacggtgagggggttctgcgcctctttgccgcaccgtcggtgccggaagca
gcgcgcgagcgactggatgggctgcgcccgggtccggagagcggttcctgtggcaatgcg
gtgctgcgcaacgactccgtctttgtcagccagaccttgcgcgatccacgttgggcgggg
cttcgggatctggccgaagagttcacccttctggcgtgctggtccactcccatccgcaat
agctacggcaatgtccttgggacttttgccctatcgagctttacggagcgggccccaaat
cgcgagcaggtgcgtctgttggaaagcatcgctgcagtgattgccgacgtgctttttcag
gaagagcgcgacgggcgggatcgttgcttcgcggcggccctgcgagccatcgacgagggc
gtggtgctgaccgatgccgagcagcgggtggtgtacgccaaccccgcctttctgcgcctg
agcggctacgaacttgcggatatcctgggcaagaactgccgcttcctgcaggggccggat
accgatcccgccacgcgtcagagtctgcacgatgccctggccgagggcagggtcttccac
ggcgatatcctcaattaccggcgggatggcacgccgttctggaacgccctgaacatcagc
ccggtacgcgatgcgcaggggcacatcacccacttcgtctcggtgcagcgagacgtgacc
ctgtcgcgccgcaccgaacaggaactgcgcctgtcggcgcaggccttcgagacgcaggaa
ggcatcctgattaccgatgcccagcgtcgcatcgtgaaggtcaaccaggccttcacccgg
gtgaccgggtataccctggaggaggttcgtgggctgaccccagctatcttgcaatcgggc
aaccaagacacggatttctacgagaccatgtggcgggagatcgagcgggaaggggcctgg
cagggagagatctggaaccggcgcaagaatggcgaggtctatccggagtttctgagcatt
actgcggtgcaggacggtaacgggcaggtcagccattacatcgggcatttcttcgatatc
agtcaccacaaggcgcgggaagccactctggagcgcctggcacgccacgatcccctgacg
ggtctgctcaatcgccgagcgttggacgaggaactgctgcgcgcgcagcgccgtgccgat
gcgcaagagcgtctcctggccgtggtgatgctggatctggacgacttcaaacccatcaac
gatcgctacggccacgatcagggagatgccctcctggtgctggtggctcaacgactgcgc
gatcatttgcggcgcagcgatgccatcgcccgccttgggggggacgagttcgtgctgatg
ctggagggccggcgcaagctagatgagctggaacccatcctggacaagctgcagcgcgcc
ctgtgtcagccctatcgactgcgcgatggggtcgaggtgcagatcggtgtcagcatgggg
gtgagcatctatcccttctccgcccaggggaacctcgatgagttgctgcgggaggcggat
caggcactgttcgccgccaagcagcaaaaaggacagcgtttgcgtccctggtccttctgg
gagccgccgcagagcgcgaggcggctctatcccttgcgggaacgctttcgggcccagggc
gtcgaggcctggtttcagcccgtctgggatcagcagtccggccgagtcgtggggatcgag
gccctggcccgcctgctcggcgacgacggttcggtcctcgcgcccggcgaattcctgccc
cagcttcaggaaaccgatatcttcgatctgaccaaccagatccttgagcagtctttgacg
gccctgacggctctggaggatctggatccagagctctgggtgtcggtgaatctcgatccc
caactcatcggcatcacctgcctcaaatgtgtgcaacagatgctgcagggccaacggatc
gcaccccagcggatcgtctttgagctcctggagagtggtgactttttggatcggcgtctg
gcgcaggaccatcttctcgatctcaaagccatcggtgttgggctcgccctggacgatatc
ggtagcggttactcttcgctgctccgcctcaaggaactgcccatcgacaagatcaagctg
gatcagtcctttgtccgtggtctggaggagcggcccggcgatctccacttcgtcgaggcc
ctgctggaactcagttccagtctgaatgtggagctggtggcggaaggtgtggagacggct
gccattcgcgatgcggtggcggtggctggggtgcgctatctgcaaggttatgccatcgcc
cgccccatgcccctggacgccctgcgtaccttcttgatctcgggctgcgagcctctgcgc
cagtcgggcccacgcagtctactggggatttatgccgaacagatgagcgagcacgcggtc
ttgcgcaaggcactgcgccaatcctggaccatcctcgatctgccgtccctgcgggacccc
cagaattgtcccacctatcgggatatctgtcgcctacccgatgcggacgctcagcggatt
ctcgcggtatatcgcgactatcacgaggccatcgccgcctttgccgacacggatgcccgg
cattggatgcagcgggtggcagaactggagcggcaacaccggcgcttgtccgacgccctg
ctggatgccattcgcactgcgagtgccacatcttcgcagtag
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