Acidithiobacillus caldus SM-1: Atc_0289
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Entry
Atc_0289 CDS
T01581
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
acu
Acidithiobacillus caldus SM-1
Brite
KEGG Orthology (KO) [BR:
acu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acu03400
]
Atc_0289
Enzymes [BR:
acu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Atc_0289
DNA repair and recombination proteins [BR:
acu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Atc_0289
Prokaryotic type
Atc_0289
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AEK56940
UniProt:
F9ZTC0
LinkDB
All DBs
Position
310823..312304
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AA seq
493 aa
AA seq
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MTDLALVWFKRDLRCTDHAPLAAAARCRSAVGLYVLEDEWLGAPEWDPQHWEFIRQSLLE
LRDNLAARGMPLLLRRGAMPLVLAQLWRDYPFTELLSHEETGSAWTYARDRRVAAWCRER
GIAWRQWPQFGVVRPLAQRDGWAEAWERFMAQPPLAAVGQLPGTTTPLDGGDIPSLDALG
LPAARPIPPAGEAAATRTLESFLAERGSRYLHTLSSPLLAERGCSRLSAHLAYGTVSMRQ
VVQRTRQRLRELRKEGSAEAGERARHLRGFLSRLHWHCHFIQKLEDEPASEFHNFSRSYD
GLREDDWSEERFLAWAEGRTGFPFVDACMRCLRATGWINFRMRAMLVSFASYHLWLHWRG
TGLFLARQFLDFEPGIHWSQMQMQSGTTGINTLRIYSPNKQWADQDPRGEFVRRWLPEWG
SSDYPSPIVDEQRAARIAKERIWARRRQPEARAEARQVLQRHGSRTDRSRRPRPKAQPQP
PTTTEQLELFAGE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgacggacttggccctggtgtggttcaagcgcgatctgcggtgtacggaccatgcccct
ttggcggcggccgcccgttgtcgcagcgcagtggggctttacgtgctcgaggacgagtgg
ctgggggccccggagtgggatccccagcactgggagttcatccgccagagtttgctggag
ctgcgcgataaccttgcggcgcggggaatgcctctgctgctacggcggggcgcaatgccg
ctggtgctggcgcagttgtggcgcgattatcctttcacggagctcctcagccacgaagaa
accggctcggcgtggacgtacgcccgagatcggcgggtggccgcctggtgtcgcgagcgc
ggaatagcgtggcgccagtggccacagtttggtgtggtccgaccccttgcccagcgcgat
ggctgggctgaggcctgggagcgattcatggcacagccgccgctggcggcggtcgggcag
ctccccggaacgaccacgcccttggatggcggcgatattcccagtctcgacgcattgggt
ctaccagcggcgcggccaataccgccggcaggcgaggccgcggctacgcgcaccctcgaa
agcttccttgccgagcgcggcagtcgctacctgcacaccctgtcgagccccctgctggcg
gagcgtggctgttcacgtctcagtgcacaccttgcttacggcaccgtttccatgcgccag
gtggtccagcgcacacgccagcgcctgcgggaattgcgcaaggagggcagcgctgaggcg
ggcgagcgggcgcggcacctgcgcggttttctttcgcgtctacactggcactgccacttc
attcaaaagctggaggatgagccggccagcgaattccacaatttttcgcgcagctacgat
ggcttgcgtgaggacgattggagcgaagagcgattcttggcctgggccgagggtcggacc
ggctttcccttcgtcgatgcctgcatgcgctgcctacgcgctacgggctggatcaatttt
cgtatgcgggcgatgttggtgagctttgccagctaccacctctggctgcattggcggggc
accggtttattcctggcgcggcagtttttggacttcgagcccggcatccattggagtcag
atgcagatgcagtcgggcacgacgggcatcaataccctacgcatctactcccccaacaag
cagtgggcggaccaggatccgcgtggggagttcgtgcgccgttggctaccggagtggggc
agctccgactacccgtcacccatcgtcgatgagcagcgggccgcccgtattgccaaggag
cggatatgggcgcgccgccgccagcccgaagcgcgcgccgaggcccgacaggttcttcag
cgccacggctcgcgcacggaccgcagccgcaggccaagacccaaggctcaaccgcagccg
ccaaccacgaccgaacagctggagcttttcgccggcgagtaa
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