Acidithiobacillus caldus SM-1: Atc_0379
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Entry
Atc_0379 CDS
T01581
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
acu
Acidithiobacillus caldus SM-1
Brite
KEGG Orthology (KO) [BR:
acu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
acu01002
]
Atc_0379
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
acu01011
]
Atc_0379
Peptidases and inhibitors [BR:
acu01002
]
Cysteine peptidases
Family C82
Atc_0379
Peptidoglycan biosynthesis and degradation proteins [BR:
acu01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Atc_0379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
AEK57030
UniProt:
F9ZSR4
LinkDB
All DBs
Position
complement(392456..393376)
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AA seq
306 aa
AA seq
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MDVVIRITLLLIGLCAATSIAAAEFPLPPPPDNLIGSLGYTDARYEDTLIDIARRHDIGY
DQIRLANPKVDPWLPGAGTPVLIPGETILPDAPRQGIVINLAAMRLFYYPEGKNGKVVVS
YPLGIGREGWRTPLGKTQVTGKVKDPTWTPPASIRAEHAEKGEILPDVVPAGPQNPLGQY
ALRLGWPGYLIHGTDKPWGVGMRVSHGCIRLYPEDIAKLFAAVPAGTPVTVVNQPWLWGR
RGDHVYLQIYPVLDDDSDPAELEAKFMLWLKESAPAGIYLEPSEALTLLHKAEGVPVLVG
ILPAAS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
ttggacgtcgtcatccgaattaccctgttgctcatcgggctctgtgccgccacgtccatt
gcggcagcggaattccccttgccaccgcctccagataacctgattggcagcctcggttac
accgacgcccgttatgaagacaccctcatcgacattgcccggcgccacgatatcggctac
gaccagatccgcttggccaaccccaaggtcgacccctggcttcccggtgcggggacgccc
gtgctgatcccaggcgagaccatactgccggacgcaccacgccagggcatcgtcatcaat
cttgcggccatgcggcttttttactaccccgagggcaagaacggaaaggtcgtggtgagc
tatcccctgggcattggccgcgagggctggcgcacgcccctgggaaagacgcaggtgacc
ggcaaggtcaaggatcccacctggacgcctccagccagcatccgcgccgagcacgcggag
aagggcgaaatactccccgatgtcgtgccggcgggcccccagaatcccctcggtcagtac
gccctgcggctgggttggcccggttatctcatccatggcaccgacaagccctggggcgtg
ggcatgcgtgtcagtcacggctgcatccgcctctacccggaggatatcgccaagctcttt
gctgcggtgcccgcgggcaccccggtgaccgtggtcaatcagccttggctgtggggccgg
cgcggggaccacgtgtacctacagatctatcccgtgctggacgatgactcggacccggcg
gaactcgaggcaaagttcatgctctggctgaaggaaagcgcaccggccgggatttatctg
gaaccaagcgaagccttgaccctattgcacaaggccgagggggtgccggtgctggtgggc
atcctgccagcggcgtcctga
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