Acidithiobacillus caldus SM-1: Atc_0394
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Entry
Atc_0394 CDS
T01581
Name
(GenBank) Putative sensory histidine kinase YfhA
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
acu
Acidithiobacillus caldus SM-1
Pathway
acu02020
Two-component system
acu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
acu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Atc_0394
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Atc_0394
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
acu02022
]
Atc_0394
Two-component system [BR:
acu02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
Atc_0394
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Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
AAA_5
AAA_16
HTH_8
Mg_chelatase
AAA_2
AAA
TP_0454_N
AAA_22
Zeta_toxin
HrcA
Motif
Other DBs
NCBI-ProteinID:
AEK57045
UniProt:
F9ZSQ5
LinkDB
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Position
complement(404183..405583)
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AA seq
466 aa
AA seq
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MSRKSLGSDPGHICIIDDDADFLRLLGLWLESEGHKVQAFSTPVQAVKAMERELPDLVIT
DLRMPEMDGMEVLEAVQELDPELPVILLTAHGSIPNAVAAMRAQAFGYLGKPFSSEELES
LVAAALRQRQASRETSRLRATLKDLAGQMILHRSPVMAKLVDELTRVAHSQASVFLTGES
GSGKERVARAIHAASPRAQGPFVAVNCGAIVADLAESELFGHVKGAFTGASQDHPGLIRA
ADGGTLFLDEIADLPLSLQVKLLRVLQEGTLRPVGSREEYRVDIRVISATHQDICALTAS
GAFREDLYYRLHVIPLRVPSLAERPEDILLLAQHFLDREIARLRRPIQGFSPEALDKLIC
RPWPGNVRELENAVTLAAALTEKGWVAAETIPDPSRAGGRSAFPPLQDAKAAFERGYLEN
LLRATDGNISRAARIAGRHRTDLYKLMRKHELTPQEFKNQGDEEAP
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgaaagtccctgggtagcgaccctggccacatctgcatcatcgacgacgatgcc
gatttcctgcgccttctcggcctctggctggagagtgaagggcataaggtacaggccttc
agcacgccggtgcaggcggtcaaggccatggagcgagaacttccggatctggtcatcacc
gacctgcgcatgcccgaaatggatggcatggaagtcctcgaagcggtgcaggagctggat
cccgagttgccggtgatcctcctcaccgcccacggcagcatccccaacgccgtcgccgcc
atgcgtgcgcaagcctttggctatcttggcaaacccttcagcagtgaggagctggaatcc
ctggtcgccgccgccctgcgccagcgtcaggcaagtcgcgaaaccagccgcctgcgcgcc
acgctgaaggatctggccgggcagatgatcctgcaccgcagtcccgtcatggccaagctc
gtggatgaactgacccgcgttgcccactcccaggccagcgtcttcctcacgggcgagagc
ggctcgggcaaggagcgggtggcgcgcgccatccacgccgccagcccccgcgcccagggc
ccattcgtcgccgtcaactgcggcgccatcgtcgccgatctggccgagagcgagctcttc
gggcacgtcaagggggccttcaccggcgccagccaggatcaccccggtctcatccgcgcc
gccgacggcggcaccctgtttctggacgagattgccgatcttcccctgagcctgcaggtc
aagctcctgcgcgttttgcaagagggcaccctgcgaccggtgggatcgcgggaggagtat
cgcgtggacatccgcgtcatcagcgccacgcaccaggacatctgcgccctgacggccagc
ggcgcctttcgcgaggatctgtactaccgcctccacgtgattccactgcgggtgccgagc
cttgccgaacgccccgaggacatcctgctcttggcccagcactttctcgatcgggagatc
gcccgcctgcgtcgccccatccaaggattcagcccggaggccctggacaagctgatctgc
cgcccctggcccggcaatgtccgcgaactggagaatgccgtcaccctggccgcagccctg
acggaaaaaggctgggtggccgccgaaaccattcccgaccccagtcgcgccggcggacgc
agtgccttcccgcctttgcaagatgccaaagcggcctttgaacgcggctatctcgagaac
ctgctgcgcgcaacggatggcaacatctcgcgggcggcgcgcattgccggtcggcaccgc
acggacctctacaagctgatgcgcaagcacgaactcaccccgcaggagttcaagaatcag
ggcgacgaggaagcgccgtga
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