Acidithiobacillus caldus SM-1: Atc_0476
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Entry
Atc_0476 CDS
T01581
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
acu
Acidithiobacillus caldus SM-1
Brite
KEGG Orthology (KO) [BR:
acu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acu03021
]
Atc_0476
Transcription machinery [BR:
acu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Atc_0476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
AEK57126
UniProt:
F9ZSY2
LinkDB
All DBs
Position
487714..488571
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AA seq
285 aa
AA seq
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MNDLVMTQRDLATVDGMAAYLRFVHAQPVLSVEEERRLARRLRDEDDVDAAKQLVLSHLR
FVVRVARAYRGYGLPEADLIQEGNIGLMKAVKRFDPEQGVRLVSFAVHWIKAEMHEFILR
NWRIVKVATTKAQRKLFFNLRSARQSSGWLGQEESAAIAEDLGVSQEAVLEMEGRMAGQD
YSLQYESDDEEGHGRTLELEDPGESSVEALIDRDWDQQRQRGLRAALQSLSERDRYIIQN
RWLSDDPKTLQALGEELGVSAERVRQLEKSGMEKLRSRLLEYVPA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatttggtaatgacgcagcgcgatctggcaaccgtcgacgggatggcggcctat
ctgcgtttcgtccacgcgcagcccgtattgagcgtggaggaggagcgcagactcgcccgt
cgtctgcgcgatgaggacgatgtggatgcggccaagcagctggtgctcagccacctgcgc
ttcgtggtgcgggtggcacgggcctatcggggctatggcctgcccgaggcggacctcatt
caggaaggcaacatcggcctcatgaaggcggtcaaacggttcgatccggagcagggggta
cgcctcgtctcctttgcggtgcactggatcaaggcggagatgcacgagttcattctgcga
aactggcgcatcgtcaaagtcgccacgaccaaggcccagcgcaagttgttcttcaacctg
cgctcggcgcgtcagagcagtggatggctgggccaggaagagagcgcagccatagccgaa
gatctgggtgtgtcgcaggaagccgtgctggagatggaagggcgcatggccgggcaggat
tattccctccagtacgaaagcgacgatgaggaggggcacggtcgcacgctggaactggag
gatcctggcgagtcctccgtcgaggcgctcatcgatcgcgactgggaccagcagcggcaa
cggggtttgcgggcagcactccagagtcttagtgaacgggaccggtacatcattcagaac
cggtggctcagtgacgatcccaagaccctgcaagctctgggagaagagttgggggtatcg
gccgagcgggtacgccagctggaaaaaagcggtatggaaaaactgcgtagtcgcctgctg
gaatacgttccggcatga
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