Acidithiobacillus caldus SM-1: Atc_0517
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Entry
Atc_0517 CDS
T01581
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
Organism
acu
Acidithiobacillus caldus SM-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
VpsR
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
AAA
AAA_2
AAA_22
nSTAND3
HTH_1
HTH_22
Pre_tape_measure
HTH_17
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AEK57167
UniProt:
F9ZSB8
LinkDB
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Position
complement(529875..531275)
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AA seq
466 aa
AA seq
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MAAKRSPRAQSTAVARSLLYVGPRAIIASSLAELESAGWGMSFAAHIDDAPGALSKIRPA
AAVIGFDEKDLLTSGQKIESIIAHHPHLRWIALLPRKALEDTSIRKLIGSAFYDYHTQPI
NTARLLVILGHAAGMAEIAEDALYIAPHEPGASKEVEMVGASPVMQQIYQDIRKVASTDA
PVLITGESGTGKELAAQAIHERSSRKDGPFVAVNCGALPANLIHSELFGHEKGSFTGAHE
RKIGRIESASGGTLFLDEIGDLPLDLQVNLLRFLQEQTIQRVGGREDIAVDVRVLAATHV
DLEKAIQLGNFRQDLYYRLNVLQIRMPPLRDREGDIPLLAQYVFNRFADERGQRVKGFSE
DALQIMANYDWPGNIRELINRVRRAMVMCDKFLITAADLGLERRRNSRIRVSLNQARDLA
ERDAIRSALADNLGSVTRAAEQLQISRVSLYRLMEKHGITPPTQQS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaacggagtccccgcgcgcaatccaccgcagttgcccgcagcctcctctac
gtcggtccccgcgccatcatcgccagctccctggccgagctggaatccgcgggctggggc
atgtccttcgccgcccacatcgacgacgcccctggcgccctgagcaaaatccggccagcc
gccgccgtcatcggcttcgatgaaaaggatctcctcaccagcggtcagaagatcgagtcc
atcatcgcccaccacccccacctgcgctggattgcgctgctgccgcgcaaggccctggaa
gacaccagcatccgcaagctcatcggcagtgccttttacgactatcacacgcagcccatc
aacaccgcccggctcctggtgatcctgggccacgctgcagggatggccgagattgccgag
gacgccctgtatatagcgccacacgaacccggcgccagcaaggaagtggagatggtgggc
gcaagcccggtgatgcagcagatctaccaggacatacgcaaggtcgcctccaccgatgcc
ccggtactcattacgggcgagagcggcaccggcaaggaactggccgcccaggccattcat
gagcgctccagccgcaaggacggccccttcgttgccgtcaactgcggcgcgctgcccgcc
aatctcatccactccgagcttttcggccacgagaagggctccttcaccggtgcccacgag
cgcaagatcgggcgcatcgaaagcgcctcgggcggtaccctcttcctggacgagatcggc
gaccttcccctggacctgcaggtcaatctgctgcgtttcctgcaggagcagaccattcag
cgcgtgggcgggcgcgaagacatcgcggtggacgtgcgcgtgctggccgctacccacgtc
gatctcgaaaaagccatacagctgggcaacttccggcaagacctctattaccgcctcaat
gtcctgcagatccggatgccgccgctgcgcgatcgcgagggcgacatacccctgctcgcc
cagtacgtcttcaaccgctttgccgacgagcgcggccagcgcgtcaagggcttcagcgaa
gatgccctgcagatcatggccaactacgactggcccggaaacatccgcgagctcatcaac
cgcgtgcgccgcgccatggtcatgtgcgacaagttcctcatcaccgccgccgaccttggc
ctggaacggcgccgcaattcccgcattcgcgtttccctcaaccaagcgcgcgacctggcg
gagcgcgacgccatccgctcggccctggcggacaacctgggcagcgtcacccgcgccgcc
gaacaactgcagatctcccgggtctcgctgtaccgattgatggaaaagcacggcatcact
ccgccgacccagcaaagctga
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