Acidithiobacillus caldus SM-1: Atc_0519
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Entry
Atc_0519 CDS
T01581
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
acu
Acidithiobacillus caldus SM-1
Pathway
acu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Atc_0519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acu03400
]
Atc_0519
Enzymes [BR:
acu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Atc_0519
DNA repair and recombination proteins [BR:
acu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Atc_0519
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
Trm112p
HypA
Zn_ribbon_RRN7
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AEK57169
UniProt:
F9ZSB9
LinkDB
All DBs
Position
complement(532478..534652)
Genome browser
AA seq
724 aa
AA seq
DB search
MAEDTGRFITQTDCTLEVAVFAPLRQTFSYRCKTPPPPTGTRVRVPFGRGHRIGIVVGYG
LEPAGTTLKDIDAILDDEPLLTPALQSLLHFGASYYQHPLGEVWATALPALLCRGRPLTS
GEAPRYACNEPSPDAATRLGPRQTALLQLLREAGPLGRQELPAALRPALPSLLARGWLRA
EDAPAPVLDLQSSPHALHPEQRDAVTALRAARDFSVFLLDGVTGSGKTEVYLETARSHLE
AGQQVLFLVPEIGLTPQLLERCRARFGSAVVASYHSGQSEAQRLRVWQGARSGRIRLIVG
TRSALFLPLARPALIVVDEEHDPSFKQQSGWLYSARDLAIRRAQLESIPIVLGSATPSLE
SLHNAHIGKYRHLRLRQRATAMNLPPMTILPMRRRLLQAGLSVDLLQACTQTLEAGHQVL
LFLNRRGYAPALLCHDCGSALFCPRCSAPMTWHRQAGRLRCHHCGHEEGHPRQCPQCASV
DLRPVGAGTEQLEDYLGQRFPGVPVLRIDRDCITQTGQLEAVLAQVHHSGPAILIGTQML
AKGHHFPRVTLVGIVNVDQSLFSADFRATERLAQTVLQVAGRAGRGSVPGRALLQSHVPE
HPLLALLQAGDYTAIAQHLLEERRVARLPPFRALALLRAEAHRLDRVQSFLAAAAERAPS
GLEISGPFPSLLERRAGFHRAELWLEAARRSELQRALKHWLTQLGTRPESRRVRWVVDVD
PLNF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagatacagggagattcatcacgcaaacggattgcacgctggaggtcgccgtc
tttgcgccgctgcggcaaaccttctcctaccgctgcaagacaccgccgccgcccacgggc
acgcgggtacgcgtaccctttggtcgcggtcaccgcatcggcatcgtcgtgggctacggc
ctcgagcccgccgggacgacgctcaaggacatcgatgccatcctcgacgacgaacccctg
ctgactcccgccctccaaagccttctgcactttggcgccagctactatcagcaccctctg
ggggaggtctgggccacggcactgccggcattgctctgccgcgggcgtccgctgaccagc
ggggaagctcccaggtacgcctgcaacgaacccagcccggacgccgcgacgcgcctgggg
ccgcgccagacggctctgctgcagctactacgggaggcgggaccgctgggccgacaggag
ctcccggcagcactgcgcccggccctgccgagtttgctcgcccgcggctggctgcgcgcg
gaggatgcgccggcaccggtcctcgacctgcagtcctcaccccatgcgctccaccccgaa
cagcgcgacgccgtgaccgcgctgcgcgctgcccgcgatttttccgtctttctgctggac
ggggtgacgggcagcggtaagaccgaggtctatctggaaacggcccgctcccatctagaa
gcaggtcagcaagtgctttttttggtgccggagatcggtctgacgccgcagcttttggaa
cgctgccgcgcccggttcggctccgcggtagtggctagctaccactccggccagagtgag
gcgcaacgcctgcgcgtctggcagggcgcgcgcagcggtcggatccgtctcatcgtcggc
acccggtccgcactcttcctgccgctggcccgacccgccctcatcgtcgtcgacgaagag
cacgacccctccttcaagcagcagagcggttggctctactcggctcgggatctggccatc
cggcgcgcacagctggagtccatacccatcgtcctcggctctgccacaccttcactggaa
agcctgcataacgctcacatcggcaagtataggcacctgaggctgcgtcaacgcgccacc
gccatgaacctgccccccatgaccatcctgcccatgcggcggcgcctcctgcaggctggc
ctatccgtggatctgctgcaggcctgtacccagaccctggaagccgggcatcaggtcctg
ctttttctgaaccggcgcggctacgccccggcactcctgtgccacgattgcggcagcgcc
ctgttctgcccacgttgcagcgcccccatgacctggcatcgccaagccggccgcctgcgc
tgccaccactgtgggcatgaagaggggcatccccgtcagtgtccccagtgcgccagcgtc
gacctgcgccccgtgggtgccggtaccgagcagctggaggattacctggggcaacgcttc
ccgggggtcccggtgttacgcatcgatcgcgactgcattacccagactggtcagttggag
gcagtgctggcccaggtccatcacagcggcccggccatccttatcggcacccagatgctc
gccaagggacaccattttcccagggtgactctggtgggcatcgtcaacgtcgaccagagc
cttttcagtgccgactttcgggccaccgaacgactggcccagaccgtcctgcaagtggca
ggacgtgccggacgcggcagtgtgcctggtcgggccctgctccagagccacgtccccgag
catccgctgctggcgctcctgcaggctggcgattacaccgccatcgcccagcacctgctc
gaagaacgccgcgtggcccggctgccgccctttcgtgccttggcattgttacgtgccgaa
gcccatcgcctcgatcgcgtacagagcttcttggcggccgcggctgagcgggcaccgtcc
gggctcgagatcagcggtccctttccgagcctcctcgaacgccgtgccggctttcatcgc
gccgagctctggctcgaggcagcccgtcgcagcgagctccagcgcgccctgaaacactgg
ctgacgcagcttggcacccgccccgagagtcggcgtgtgcgttgggtcgtggacgtcgat
cccctcaacttctga
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integrated database retrieval system
