Acidithiobacillus caldus SM-1: Atc_0579
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Entry
Atc_0579 CDS
T01581
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
acu
Acidithiobacillus caldus SM-1
Pathway
acu00260
Glycine, serine and threonine metabolism
acu00630
Glyoxylate and dicarboxylate metabolism
acu00670
One carbon pool by folate
acu00680
Methane metabolism
acu01100
Metabolic pathways
acu01110
Biosynthesis of secondary metabolites
acu01120
Microbial metabolism in diverse environments
acu01200
Carbon metabolism
acu01230
Biosynthesis of amino acids
acu01240
Biosynthesis of cofactors
acu04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
acu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Atc_0579
09102 Energy metabolism
00680 Methane metabolism
Atc_0579
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Atc_0579
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Atc_0579
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Atc_0579
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Atc_0579
Enzymes [BR:
acu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Atc_0579
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Met_gamma_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AEK57229
UniProt:
F9ZMB5
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Position
587982..589226
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AA seq
414 aa
AA seq
DB search
MFSKTLNLSQFDPQLWEAMQHESQRQEDHVELIASENYASPLVMAAQGSVLTNKYAEGYP
GKRYYGGCEYVDIAEQLAIDRARALFGAEHANVQPHSGSQANQAVFFSVLKPGDKIMGMS
LAHGGHLTHGAKVNLSGKLFEVVAYGVREEDGRIDYDALAEQAERERPRMIIAGASAYSR
IIDFARIGEIARSVGAYFLVDMAHIAGLVAAGLHPSPVPHADFVTTTTHKTLRGPRGGLI
LCKEEYAKKVNSLIFPGIQGGPLMHVIAAKAVAFLEAQRPEFRAYQQRVIANAQRLSAVL
AQRGYGAVSGGTDNHLFLLNLGERITGKDAEAALGAAHITVNKNAVPFDSRPPAVTSGIR
IGTPAATTRGFDLGEMDVLGAAIADVLDCAEDDKVIAEVRERIVALCRRFPVYG
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgttttccaagaccctgaacctgtcccagttcgatccccagctgtgggaggcgatgcag
cacgagtcccagcgccaggaggatcacgtcgaactcatcgcctcggaaaactacgcgagt
ccactggtcatggccgctcagggctccgtcctcaccaacaagtacgcggagggatatccg
ggcaagcgctattacggtggctgtgagtatgtggacattgccgagcaactggccatcgat
cgcgcccgcgccctgttcggtgccgagcatgccaacgtgcagccgcactccggctcccag
gccaaccaggcggtcttcttttcggtcttgaagcctggagacaagatcatgggcatgagc
cttgcccacggtggccatctgacccacggtgccaaggtcaatctctcgggcaagcttttc
gaggtggtggcctatggggttcgggaagaggacggacgcatcgattacgatgcccttgcc
gagcaggccgagcgggagcgtccacgcatgatcatcgccggcgccagcgcttattcgcgg
atcatcgactttgcgcggatcggtgagatcgcccgtagtgtcggcgcctacttcctggtg
gacatggcccacattgccggcctcgtcgcggcgggcctgcacccaagccccgtcccccac
gcggatttcgtcaccaccaccacccacaagaccttgcgcggtccccggggcggtctgatc
ctctgcaaggaagagtacgccaagaaggtcaactcactgatttttcctggtattcagggt
gggcccctgatgcacgtcatcgctgccaaggccgttgccttcctcgaggcgcagcggccc
gagttccgcgcgtatcaacagcgcgtcattgccaatgcccagcggctcagcgccgtactg
gcccaacgcggctatggagcagtttccggaggtacggacaatcacctcttcttgctcaat
ctgggtgagcggatcaccggcaaggatgccgaggcggccctgggtgcggcgcacatcacc
gtgaataagaatgccgtacccttcgacagtcgaccgccggcggtaaccagcggtatccgc
atcggtacccccgctgcgaccacgcgtggctttgatctgggagagatggacgtgctcgga
gcggccattgccgatgtgctggattgcgccgaggacgacaaggtcatcgccgaggtgcgg
gagcgtatcgttgccctgtgccggcgttttccggtgtacggctga
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