Acidithiobacillus caldus SM-1: Atc_0669
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Entry
Atc_0669 CDS
T01581
Name
(GenBank) putative DNA polymerase-like protein, bacteriophage type
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
acu
Acidithiobacillus caldus SM-1
Pathway
acu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Atc_0669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acu03400
]
Atc_0669
Enzymes [BR:
acu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Atc_0669
DNA repair and recombination proteins [BR:
acu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Atc_0669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEK57318
UniProt:
F9ZMG9
LinkDB
All DBs
Position
665554..666447
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AA seq
297 aa
AA seq
DB search
MGGPWSWFMNRRQRLFFEVLGLDLAGFPLPGPGTDADPRPTALAGKGTPSLPALAPAPPI
PEVARSEPKVTAATAALVIDPASAEEQEHEPLAVEPMEVMPADRDQVRRQAISAMDWQAL
KERIETCRACSLGSTRQNAVVGAGSPEGSWCFVGEAPGAEEDRRGEAFVGRGGQLLDAML
AAMSLSRAREVYIANVLKCRPPNNRDPLGPEVRSCLPYLERQIALVQPRILVALGRFAAQ
SLLQTSTPIGQLRGRVWEYRGIPLVVTYHPAYLLRNPLEKRKVWEDLKLALSVYPKD
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgggcggtccgtggtcgtggttcatgaatcggcgccaacgcctcttctttgaggtcctg
ggcctcgatcttgccggctttccgctcccgggcccgggtaccgatgcggatccgagaccc
acggcgctggccggcaagggcacaccaagccttccggcccttgcgccggctcccccaatc
ccagaggtagcccgctctgagccaaaggtgaccgccgcgacagccgcgctggtgatcgat
ccggccagtgccgaggagcaggaacatgagcctttggcggttgagcctatggaggtgatg
cctgcggatcgggaccaggtccgtcggcaagccatctccgccatggactggcaagcactg
aaagagcgtatcgaaacctgccgtgcctgcagtctgggcagcactcggcaaaacgcggtg
gtgggagctggcagtcccgagggatcctggtgtttcgtgggcgaggccccgggcgcagag
gaggatcgtcgcggtgaagcctttgtcggtcgcggcggccagcttctggatgccatgctg
gcggccatgtccctgagtcgcgcacgggaggtctacatcgccaatgtgctcaagtgccgt
ccgcccaacaatcgtgatcccttggggccggaggtgcggtcctgcctaccctatctggaa
aggcagatcgctttggtccagccgcgcatcttggttgccctggggcgcttcgctgcgcag
tcgctgctgcaaaccagcacccccatcgggcaactgcgtgggcgcgtctgggagtatcgc
ggcatccccctggtggtgacctaccacccggcttatctgctacgcaacccgctggaaaag
cgcaaggtctgggaagacctgaaactcgcgctctcggtttatcccaaggattga
DBGET
integrated database retrieval system
