Acidithiobacillus caldus SM-1: Atc_0877
Help
Entry
Atc_0877 CDS
T01581
Name
(GenBank) Exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
acu
Acidithiobacillus caldus SM-1
Pathway
acu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Atc_0877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acu03400
]
Atc_0877
Enzymes [BR:
acu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Atc_0877
DNA repair and recombination proteins [BR:
acu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Atc_0877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AEK57526
UniProt:
F9ZKZ9
LinkDB
All DBs
Position
complement(879086..880426)
Genome browser
AA seq
446 aa
AA seq
DB search
MTNEAEIPALSVSELNRSVREILEGNFPLLRVTGEISNFVQPASGHWYFSLKDDRAQVRC
AMFRARNALCRLRPKDGLQVQVLAQPTLYEGRGDFQLLIESLTAVGAGDLQARFAALKEK
LAAEGLFAPELKRPLPAWPRRVAVISSASGAALHDIRVTLARRWPVLEIVVYPVLVQGDQ
AAAQICAALQRAGQRAQEDLVILARGGGSAEDLWCFNEESVARAIRACPLPVVTGIGHEI
DFTIADFAADLRAPTPTAAAEAASPDGIEIRDRIEKLKQQLTRAMVRRLREETQRLDHLR
LRLRDPRQALDHGQHRLAGLQQRLRQAVRRRLWEARERLANLDRRRRSHHPQHLLLQGER
NLLNQRKALERAMGLRLEHQQQRLQQLRNALQLLNPEAVLQRGFSILRDGDGQIVRDSRS
VGLGAELDATLARGRLRLQVRGRSPE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatgaggcggaaatcccggcactgagcgtcagcgaattgaatcgcagtgtgcgt
gagattctggagggtaattttccgctgctgcgcgtgacgggtgagatctccaattttgtg
cagccggcctcgggacactggtatttttccctcaaggacgaccgggcgcaggtccgttgt
gccatgttccgggcgcgcaatgccctgtgccgcctgcgcccaaaagacggtctccaggtg
caggtgctggcccagcccaccctgtacgagggacgcggggattttcagctactcatcgaa
agcctcacggcggtgggtgcaggggatctccaggcacgctttgccgccctgaaagaaaaa
ttggcggcggaggggctcttcgccccggaactcaagcgtcccttgccagcctggccgcgg
cgcgtggcggtcatcagttccgccagcggcgccgccctgcacgacatccgggtgaccctt
gcccgacgctggccagtgctggaaatcgtcgtctacccggtattggtccagggcgatcag
gctgcagcccagatctgtgccgcactgcagcgcgcagggcagcgggcgcaggaagatctc
gtcatactcgcccgcggcggtggtagtgcggaagatctgtggtgtttcaatgaggaatcc
gtcgcgcgcgcgatccgggcctgtcccctgccggtggtaacgggtatcggccacgagatc
gacttcaccatcgccgactttgctgcggatctccgcgcaccgacgccaacggctgcggcg
gaggcggcaagccccgatggcatagagattcgcgaccgcatcgagaaactcaaacaacag
ctgacacgggccatggtccggcggctgcgcgaggaaacgcagcgtctggatcacttgcgc
ttgcgtctgcgtgacccgcgccaggccctggaccacgggcaacaccggcttgctggcctg
caacagcgtttgcgccaagccgtgcgccgacgcttgtgggaagcacgcgagcggctggca
aatcttgaccgtcggcggcgcagccaccacccgcaacacctcctcttgcagggcgagcgc
aacctgctgaaccagcgtaaggccctggagcgggccatgggcctgcgcctggaacaccag
cagcagcgcctgcagcaattgcgcaacgccctgcaattgctgaatccggaggcggtgctc
cagcgcggtttctccattcttcgagatggcgatggccaaatcgtgcgcgacagtcgtagc
gttggccttggggcagaactggacgcgaccctggcgcgggggagactgcggctgcaggta
cgtggacggtcgccggagtga
DBGET
integrated database retrieval system
