Acidithiobacillus caldus SM-1: Atc_0883
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Entry
Atc_0883 CDS
T01581
Name
(GenBank) Lytic transglycosylase, catalytic
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
acu
Acidithiobacillus caldus SM-1
Brite
KEGG Orthology (KO) [BR:
acu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
acu01011
]
Atc_0883
Enzymes [BR:
acu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Atc_0883
Peptidoglycan biosynthesis and degradation proteins [BR:
acu01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Atc_0883
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Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
TPR_19
TPR_4
Motif
Other DBs
NCBI-ProteinID:
AEK57532
UniProt:
F9ZL05
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All DBs
Position
complement(884103..886055)
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AA seq
650 aa
AA seq
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MLLPALVTAGTELTAAQQQLLRQAAEGFANKDYLPAASALPDLAQTYMGSWVGYWALQPR
LSTLTQSQYEAYIHQFPSGVAPELLRRQWLLQLGKRQDWADFAKVYRQGPTPRLISLRCY
AASDPLLSSAVDLEPPLLLWRAASPSDRACNGLAKTALAAGQIPQSALWQQLQRFFREGF
FQQALQFAPFLPPSAARNLPKLIQDPGAWIVTRTAPEAAGTEPAVARQLITLAWLQLAYQ
QPERAVAWISSSRGQGLPAALRAEILYEAAWSGARQLHLEAATWYAEAYRSDPDYRPSDE
VLAWMIRAALRARDWPLVERAYARMSTAQRKRGEWQFWNAFAQWQQGRVDAARATFARLA
WPWDYAGQLSLAALGRPLRLPEPSADPAPKATPALTSRGDFRRAITLYQLGLYFDALAEW
QHVLDGLSDANAIRSAAAAAADRQAWLLVINASTRVPKDGDWRQGYVLPFPRAILAAAQD
HALDPAFVAGLIRQESGFAPGIASSAGAQGLMQVMPATAAWIKGRDPTLAGADLHSNSGN
LDIGSAYLAHVLHRFQGALPLAAAAYNAGPGAVQRWLQRWSPEPGPWGGAIFAANIPYQQ
TRDYVQAVLSNAAIYSALLQGKEPDILSLWQLQPDLGLEPAAATATTPRP
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
gtgttgctcccggcactggtcacggccgggaccgaactcacggcggctcagcagcagcta
ctacggcaagcggcggagggcttcgccaacaaggactatctaccagcggcgagcgccctg
cccgacctcgcccagacctacatgggatcctgggtgggctactgggctctgcagccacgt
ctgtccaccctcacccagagccagtatgaggcatacattcatcaatttccctcgggagtg
gcaccagaactgttgcgtcgccagtggctcctgcaactgggcaagcgtcaggactgggcc
gactttgccaaggtctatcgccaggggcccacgccgcggctcatcagtctgcgctgctac
gctgccagcgaccccttgctgagctccgcggtggatctggagccgcccttgctcctgtgg
cgtgctgcctcgccctccgaccgggcctgcaacggcctggcgaaaacggcgctggccgcc
ggccagataccgcagtcggcactttggcagcaattgcaacgcttttttcgcgaagggttc
ttccagcaagctttgcagtttgctccctttctgccgccatcggcagcgcgcaacctgccg
aaactgatacaggaccccggcgcgtggatcgtgacgcggaccgctccagaggctgcgggt
acggaacctgcggtcgctcggcagcttattacgctcgcctggttgcaactcgcctatcag
caaccggaacgcgccgtagcctggatttcctcgagtcgggggcaggggctgcccgcggcg
ctgcgcgctgaaatcctgtacgaggcggcctggagcggggcacggcagctgcacctcgag
gcagcaacctggtatgccgaggcctatcgcagcgatcccgactatcgacccagcgacgag
gtgctggcctggatgatccgtgccgccttgcgcgcccgcgattggcccctggtggagcgc
gcctatgcacggatgtcgacggcacagcgtaagcgcggcgagtggcaattctggaatgcc
tttgcccaatggcagcaggggcgtgtggatgcggcgcgggcaacctttgcccggctggca
tggccctgggactacgccggccagctttccctggcggcgctggggcgccccctgcgcttg
ccggaacccagcgcggatccggctccaaaggctacgccagcgctgaccagccggggggat
ttccgacgcgccattaccctgtaccagctcggcctgtattttgacgccctggccgagtgg
cagcacgtcctcgatggcttgtccgacgccaacgctattcgctcggcggcggctgccgct
gcggaccgacaggcctggctactggtcatcaatgccagcactcgggttcccaaggatggc
gactggcggcagggctatgtgctaccctttccccgcgccattcttgcagcggcgcaagac
catgccctggacccggccttcgtggccggtctgatccggcaggagtcgggcttcgctccg
ggtattgcctcgtcggcaggcgcgcagggactcatgcaggtcatgccggctacggcggcc
tggatcaaaggtcgtgacccgaccctcgccggcgccgacctgcacagcaatagcgggaat
ctggatatcggcagtgcctatctggcacacgtgctccaccggtttcaaggggcgttgcca
ctggctgcggccgcctacaatgccgggccaggcgccgtccagcgctggctccagcgctgg
agcccagagccaggcccctggggcggagccattttcgcagccaacattccataccaacag
acccgcgactacgtgcaggcggtgctgagcaatgcggccatctacagcgccctgctccag
ggcaaggaaccggacatcctgtccctgtggcaactgcagccggaccttggtctcgagccc
gcggcggccactgccaccacccctcggccttaa
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