Acidithiobacillus caldus SM-1: Atc_1029
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Entry
Atc_1029 CDS
T01581
Name
(GenBank) putative TraI protein
Organism
acu
Acidithiobacillus caldus SM-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
AAA_19
Viral_helicase1
TraI_hel_assoc_N
ABC_tran
DUF87
nSTAND3
AAA_22
UvrD_C_2
MobB
TrwB_AAD_bind
SH3_13
NTPase_1
PRK
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AEK57678
UniProt:
F9ZL92
LinkDB
All DBs
Position
complement(1016198..1019365)
Genome browser
AA seq
1055 aa
AA seq
DB search
MESKHEEYLTKAGEQRATGYYSMAGGAPSEWFGRGAEAQGLTGPVVAEDMIRALSGTVKH
TGEDISTRGGQTAETRRMGEELTIAAPKSVSIMAVEDPRIVQAHQSAVRAAMKYVEQEMV
HARIGKGGGKGNDFSGNLTAGLYVHEDARDSSTGRVAPHLHTHAIISNMTQRADGKWVNL
KLDWGHNNEKKMAADAVYKAELAREVKALGYQIEKGKGADFEIAGITREQIEYFSPRSQD
IKKEIGGERDAVSPKERQAAQNKTKGHKSTLNNIDQRYEWRKEFREQNMDLHSLHDAALR
REAAGVQGSQITAEDALKSAIRHLSERDSVFSEQSLKAEALAAGLGDVSPEGLDAAIEAR
AGGLVYAGEAEGLNDRQFTTKAAIYTEAEILHRGKEGRGKAEAIYPVQEVQEPLEVITLN
DKELQDGKRSYDNPVNNVEATGTLSANGLRELSEQRLDANQTGGEDSSVLHGNEGLDRSG
NPDLRRSGDDPRINAIISTQEEKQGFKFSVGQKAAVELALSSNDRHLGVVGSSGAGKTTS
MKVIVSEYQKAGYQVIGVAPTSKAKRELEGAGCNETVTLADALLRKPSLDESGKPTQKIL
YVMDEAGMVSSRDFDRFYKRADLENARSLVVGDPYQIESVEAGTPFAQLLETGSIDHVKI
DEVQRQRAAPELLKIAQAFASGDAEKGVELAKPFMTQVAVAKGEDKDEALAKVAAQGYMS
MTQEERADSYFIADTNKKRQAINDEVRSGLIKEGSLGANAVKITALDKLDLTKEAATKAE
NYVHKKDKDAEIIVEFNRTYKDKDSGVEAEAEKGSQWVVTNTSGGKLTLQDRNDPEKKLQ
VNPVKVSISAYTAREMELRSGDQVYFRKNDKTRDLINGTAGTVIVENGKASVKTDQGQIV
PLHEVKGEVLDYGYAVTTHASQGGTKHTAIPVLTGGGRGMNANLAYVAMTRETHSLEVIT
DDVEKLGKSICKFSDRQSAIGAAKTEVSPELDEIRQARRAADYELGQAGDLAEKRSLEVE
PEQEHIGEQEPEVGIADRKEYQFSSEQEHELELGD
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggagagcaagcatgaggagtacctgaccaaggccggagaacaacgtgcaacaggctac
tattccatggccgggggggcacccagcgaatggtttggaaggggggcggaggctcagggg
cttacgggaccggtggtggcggaagacatgattcgtgcgctatctggcaccgtgaagcac
accggcgaagacataagtacaagaggcggacagaccgcggaaacgcgcagaatgggtgag
gaactcaccatcgccgccccgaaatccgtctccattatggccgtggaggatccacgtatt
gtccaggctcaccagtccgccgtcagggctgctatgaaatacgttgagcaagaaatggtt
catgccaggataggaaaaggcggaggcaaaggtaatgacttcagcggaaatttaacggca
gggctttatgtgcatgaagacgcccgcgactcatcgacggggcgggtagcccctcatctt
cacacccacgcgattatttcaaacatgacgcagcgtgcggatgggaaatgggtgaatctc
aagctggactggggtcataacaacgaaaaaaagatggccgctgacgccgtttacaaagcg
gaactggcccgcgaggtcaaagctcttggataccagatcgaaaaaggcaaaggcgcagac
ttcgagattgcaggcatcacccgtgaacaaattgaatacttttctccacgctcccaagac
ataaaaaaagagatcggtggtgaacgggacgctgtgtcgccgaaagagcgccaggcggca
caaaataagacaaaaggccacaagtccaccctcaacaacattgaccagagatatgaatgg
agaaaagagttccgtgagcaaaacatggatcttcattcccttcatgatgccgccctgcgc
cgtgaagccgccggcgtccaaggatcgcaaataacagcagaagacgcgctgaaatccgcc
attcgccacctcagtgaacgcgacagtgttttcagtgagcagtcattaaaggcagaagcc
ttggccgctggcctgggcgacgtttccccggaaggcctcgatgccgccatcgaggcccgt
gccggtggcctggtgtatgccggtgaagctgaggggctgaacgatcgccagttcaccacc
aaggccgccatttacaccgaagcagaaattctacatcgaggaaaggagggaagaggaaaa
gcagaggctatttatccagttcaggaagtacaggaaccactagaggttatcactcttaac
gacaaggagttacaagatggcaaacgaagctatgacaacccagtcaataacgttgaagca
actgggacactctccgctaacggcttgcgcgagttgtccgaacagcgtctggatgcaaac
cagaccggcggggaagattcaagtgttttgcatggtaatgagggccttgatagatcagga
aatccggatctgcgacggtcaggcgatgacccgcgaataaacgcgatcatctcaacgcaa
gaagaaaaacaagggttcaagttcagcgttggtcaaaaggccgccgttgaactggctctt
tcttcgaacgaccgacatttaggagttgtcggctcgtcaggcgcgggcaaaaccacatca
atgaaagtgattgtctctgaatatcagaaggcgggttatcaggttattggtgtcgcaccg
acatcaaaagcgaagcgagagcttgagggtgccgggtgtaacgaaacggttacccttgcc
gatgccctattgcgcaagccatcgctggatgaatccggcaaaccgacccagaagatttta
tacgtgatggatgaggccggaatggtgtcatcccgtgacttcgaccgcttctataagcgc
gcggatctggaaaacgcccgcagcttggttgtgggtgatccatatcaaatagaaagcgtc
gaggcagggacgccgtttgcgcagttgctggaaaccggttcaatagatcatgtgaagatt
gatgaggttcaacgtcagcgtgcagcgcctgaattgctcaagattgcccaggctttcgca
tccggagacgctgaaaaaggcgttgaactggccaagcccttcatgacacaagtcgcggtt
gcaaagggcgaagacaaggatgaagcgctggcaaaagttgcggcgcagggttacatgtcg
atgacccaggaagagcgtgctgattcctacttcattgcagataccaacaaaaaacgtcag
gcgatcaatgacgaggtgcggtcagggctgataaaagaagggagtcttggcgcgaacgca
gtgaagataaccgcgctggacaagttggatttgacaaaagaagccgcaaccaaggcagaa
aattatgtccataaaaaagacaaggatgccgaaataattgtggagtttaaccgcacatat
aaggataaggactctggcgttgaggctgaggcggaaaaaggtagccaatgggttgttacg
aacacatcaggcggaaagctgacattacaagataggaatgaccctgagaaaaaattgcag
gtcaaccctgtaaaggtatcaatatcggcatacaccgcacgagaaatggagttgaggagt
ggcgaccaggtttactttcggaaaaacgataaaacgcgggatttaatcaacggcacggct
ggcacggtgatcgttgaaaacggcaaagcatccgtgaaaacggatcagggacagatcgtt
ccgcttcacgaggtgaaaggggaagtgctggattacggttacgccgtcacaacccatgcc
agtcaaggtggcacgaagcatacagctatccctgtgctcacggggggagggcggggtatg
aacgcgaacttggcgtatgttgccatgacacgggaaactcattctctggaggtaataact
gatgacgtggaaaagttgggaaaaagtatctgcaagttttccgatcggcagtctgccatt
ggggcagctaaaacagaggtgtcccctgaactggatgaaatccgccaagcgcggcgggca
gccgattatgaactgggtcaggctggcgaccttgccgaaaagcgctcactggaagtggag
ccagagcaggagcacataggcgaacaagaacccgaagttggtattgctgaccgcaaggaa
tatcagttctcgtctgaacaggagcatgaactggagcttggagactag
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integrated database retrieval system
