KEGG   Acidithiobacillus caldus SM-1: Atc_1203
Entry
Atc_1203          CDS       T01581                                 
Name
(GenBank) TrbI protein
  KO
K20533  type IV secretion system protein TrbI
Organism
acu  Acidithiobacillus caldus SM-1
Pathway
acu02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:acu00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Atc_1203
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:acu02044]
    Atc_1203
Secretion system [BR:acu02044]
 Type IV secretion system
  Trb secretion system protein
   Atc_1203
SSDB
Motif
Pfam: TrbI
Other DBs
NCBI-ProteinID: AEK57852
UniProt: F9ZMU3
LinkDB
Position
1212442..1213758
AA seq 438 aa
MADNSTPAGERSKKVRGNLIPDKTQLGAHLRSGKIAAFTVVGVVAIAAGGFWAIGALHGF
GGAAKPAPMHPHKAPEIAPQPKSAPSISTPKPSTPSAPAKSAATTQPRGYESLHRTGVPP
AGQPSAGLPSAGLPSAGPSPQMLAFQQALGQQGGSGEKVISWSGPSAGEPLSLQPTGMTA
SDALAQSLAMAKAASQKPSDASVSVYSTHLVRKEVSPYELLQGTVIPGILTTGIKSDIPG
QVTAVVPHPVYNSLNGAYVLIPAGSRLIGQYAASSAMGQTRVNVAWTRIEFPNGTYIQLS
RMPGTAPDGYAGFHDLVNNHTWTIFKNALLLSLIDVGMAVASPTSTSTNTTGVTGNQALQ
DGEQALAQTFGQAEAQLFQRYINIAPTLTIRPGYAFNVVVTKDLVFPGPYRHGTNLVATS
ANPRSPAQPTTIDPYPEP
NT seq 1317 nt   +upstreamnt  +downstreamnt
atggcggacaacagcacgcctgctggcgaacgctccaaaaaggtccggggaaacctgatc
ccggacaaaacccaactgggtgcccacctgcgatcgggcaagatcgcggccttcaccgtc
gtgggggtcgtcgccatcgccgccggtggcttttgggccatcggtgcgctgcacggtttt
ggtggtgctgccaaaccggcgcccatgcatccccacaaggcgccagaaatagcgccacag
cccaagtccgctcccagcatatcgaccccgaagcccagcacgccgtcggctccggccaaa
tcggccgcaactacccagccccgcggctatgaatcgctgcacaggacaggcgtgccgccg
gcaggacagccgtccgcaggactgccgtccgcaggactgccgtccgcaggacccagcccg
cagatgctggcctttcagcaggcgctcggacagcagggtggctccggcgaaaaggtgatt
tcctggagcggcccgtcagccggtgagccgctgtccttgcagcctaccggcatgacggcg
tccgatgccctggcacagtccctggcgatggcaaaagccgcaagccagaaaccttcagat
gcatcggtaagcgtctacagcacgcacctggtgcgcaaggaagtgagtccctacgaactc
ctccagggaaccgtcattccggggattcttacgaccggcatcaaatcggacatcccgggc
caggtcaccgccgtggttccccatcccgtctacaacagcctgaacggcgcctacgtcctc
atcccggcgggatcccggctcatcggccaatacgcggcttccagtgccatgggacagacc
cgggtaaacgtcgcctggacccgcatcgaattccccaatggcacctatatccagctgtcc
aggatgccggggaccgcgcccgatggctacgccggtttccacgatctggtgaacaaccac
acctggacgatcttcaagaatgccctgctgctgtcgctcatcgacgtgggcatggccgtt
gcgagcccgacgagcaccagcacgaatacgacgggggtgactggcaaccaggccctgcag
gacggcgaacaggccctcgcccaaacctttggccaggcggaggcccagttgttccaaagg
tacatcaacatcgcgcctaccctgaccatccgtccagggtacgccttcaatgtggtggtc
accaaggacctggtgttccccggtccctaccggcacggcaccaatctcgtggcgacttcg
gccaatccccgatcgccagcccaacccaccaccatcgatccgtatccagaaccgtaa

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