Acidithiobacillus caldus SM-1: Atc_1214
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Entry
Atc_1214 CDS
T01581
Name
(GenBank) DNA polymerase III beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
acu
Acidithiobacillus caldus SM-1
Pathway
acu03030
DNA replication
acu03430
Mismatch repair
acu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Atc_1214
03430 Mismatch repair
Atc_1214
03440 Homologous recombination
Atc_1214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acu03032
]
Atc_1214
03400 DNA repair and recombination proteins [BR:
acu03400
]
Atc_1214
Enzymes [BR:
acu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Atc_1214
DNA replication proteins [BR:
acu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Atc_1214
DNA repair and recombination proteins [BR:
acu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Atc_1214
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta_3
DNA_pol3_beta
Ydc2-catalyt
Motif
Other DBs
NCBI-ProteinID:
AEK57863
UniProt:
F9ZMV4
LinkDB
All DBs
Position
complement(1224245..1225432)
Genome browser
AA seq
395 aa
AA seq
DB search
MERQLSIDTLRKIATASAALVKGNSVQPIYDHVLIEDQRVVLGNATTQLEWFLDEEERSF
GFAPEAYPARDLERIAKSLPDGAQVQFGEQGQIRCGRSRFRLPVYDGAQYPVREEPLPSA
WIRVQTQDLERIFPSLRRCVAKNDTRTYLNGIHWQIRRVGEQESLLVLEATDGHRAARFS
LEYTPPLDSAHSPSGASADTEPSVPTLDAILPVEGISAWMKLLSSRKIAEFSIAQIRSGV
LFQGGGLRLWLTSLDGRYPSLDTILAQLEKRKDVLSLSIADFQRALTLATIGVGENQVVT
LSTAPEHLLSVAAKGEERQAEDQIPAQWSGSLPLRYSFNIQYLMDVVDSVKETTKGSEDT
EDPHMALRFDVSEKDPTSTFAEVPGGVLVVMPIRE
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggaacggcaactcagcatcgataccctgcggaaaatcgccacggcgtcggctgccctg
gtcaagggcaattcggtacaacccatttacgatcacgtactcatcgaagaccagcgggtg
gtcctgggtaatgcgactacccagctggagtggtttctggacgaggaggagcgcagtttt
gggttcgcgccagaggcttatcccgcgcgggatctggagcgcatcgccaagagcctgccc
gacggtgcccaggtgcagtttggagagcagggacagattcgttgtggacggtcacgtttt
cgtctgcccgtctacgacggtgcgcagtatccggtaagggaagagcctctgccgagtgcc
tggatccgcgtccagacccaagacctggagcgcattttcccttccctgcgccgctgtgtc
gccaaaaacgatacgcgcacgtacctgaacggtatccattggcagattcggcgtgttggc
gagcaggaaagcctgttggtgctggaggcgacggacggccaccgtgctgcgcggttttct
ctggagtacaccccgcctttggattctgcgcatagcccatcgggggcgtcggccgatacg
gaaccatcggtgcctaccctggacgccatcctgccggtagaaggaatctccgcctggatg
aaactcctgtccagccggaagattgctgagttttccatcgcgcagatccggtctggggtg
ctttttcaggggggtggtttgcgcctgtggctgacgtccctcgatggtcgctatccgagt
ctggacacgattctggcgcaactggagaaacggaaggatgtgctatccctgtccatcgcc
gatttccagcgggccttgacgcttgccaccatcggtgtgggcgaaaaccaggtggtcacc
ctgtccacggctcccgagcatctgctttccgtggcggcaaagggggaggaacgccaggcc
gaagaccagattcccgcccaatggtcgggttccctaccgctgcgatacagcttcaacatt
cagtacctcatggatgtcgtggattccgtcaaagagaccacgaagggttccgaggatacg
gaggatccgcacatggcgctgcgtttcgatgtgtccgagaaagacccgacgtcgaccttt
gcggaagtgcccggtggcgtgttggtcgtcatgccgattcgggaatag
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