Acidithiobacillus caldus SM-1: Atc_1830
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Entry
Atc_1830 CDS
T01581
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
acu
Acidithiobacillus caldus SM-1
Pathway
acu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Atc_1830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acu03400
]
Atc_1830
DNA repair and recombination proteins [BR:
acu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Atc_1830
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Atc_1830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
AAA_22
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AEK58478
UniProt:
F9ZPR1
LinkDB
All DBs
Position
complement(1889400..1891430)
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AA seq
676 aa
AA seq
DB search
MEKALSLESVFPPCGDQPVAIAELVDGLASGESFQTLLGVTGSGKTFTMANVIARTQRPA
IVMAPNKTLAAQLYAELRAFFPHNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIE
QMRLSATKALLERPDVVIVATVSAIYGLGDPAAYHNMILHLREGDAMDQRAILRRLADMQ
YSRNPMELKRSTFRVNGDVIDIWPAESEDEAVRVELFGDEIERISLFDPLTGKTITRLPR
YTVYPKSHYVTPREQILAAIEQIKDELRERLDVLRRENKLVEAQRLEQRTRFDLEMMAEL
GYCSGIENYSRYLSGRAPGEPPPTLMDYLPANALLFIDESHVTVPQIGGMYKGDRSRKET
LVEYGFRLPSALDNRPLMFPEFEALMPQTIFISATPGPYELSRSGRVVEQVVRPTGLVDP
EVEVRPAKGQVDDLVSEIHAVIASGWRVLVTTLTKRMAEDLSDYLHELGIQCRYLHSDIE
TVERVEIIRDLRAGVFDVLIGINLLREGLDMPEVALVAILDADKEGFLRSERSLIQTIGR
AARNLHGRAILYADTITGSMARAMEETERRRNKQIRFNAEHGITPKGIVKPVADILEGVY
RRNGSGARTKAAEPTPTYADVKDPRALAKRIRELEETMHRHARNLEFEQAAALRDQIRIL
EAEILGLDVEVDLVAD
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagccctgagtctggagagtgtttttccgccctgtggggatcagcccgtggcc
attgccgaactggtggatggtttggcgtcgggggagtcctttcagaccttgctgggggtc
acgggctcgggcaagacctttaccatggccaatgtcatcgcccgcacccagcgcccggcc
atcgtcatggcgcccaacaagaccctggcggcgcagctgtatgccgagttacgggccttc
tttccgcacaatgcggtggagtatttcgtcagttactacgactactaccagcccgaggcc
tatgtgccttcgtccgataccttcatcgagaaggacgcctccatcaacgatcacatcgag
cagatgcggctgtcggcgaccaaggccctcttggagcgtcccgatgtcgttatcgtggcc
acggtatcggccatctacggcctcggtgatcccgctgcctaccacaacatgattctgcat
ctgcgggagggggacgccatggaccaaagggccatcctccgccgtctggcggacatgcag
tacagccgcaatcccatggaactcaagcgcagtacctttcgggtgaacggggatgtcatc
gatatctggccggccgagagcgaggacgaggcggtacgggtggagctctttggcgacgag
atcgagcgcatctccctgttcgatccccttacgggcaagaccatcactcgcttgccgcgc
tatacggtctaccccaagagccactatgtcacgccacgggagcagattctggccgctatc
gagcagatcaaggacgaactgcgcgagcgtctggacgtgctgcgtcgtgaaaacaagctg
gttgaggcgcagcggctggagcagcggacccgttttgatctggagatgatggcggaactg
ggctattgctccggtatcgagaactactcccgctacctgtcgggacgggcgcccggcgag
ccgccgccgacgctgatggattatctgccggccaatgccttgctgttcatcgacgagtcc
cacgtgaccgtgccacagattggcggcatgtacaaaggcgatcgctcgcgcaaggaaact
ctggtggaatatggcttccgcctgccttcggcactggacaaccggcccttgatgtttccg
gaatttgaagccctcatgccccagacgatcttcatctcggccacccccggaccctacgag
ctgtcccgttccgggcgtgtcgtcgagcaggtggtgcggcccacgggcctggtggatccg
gaggtggaggtgcgtccagccaaagggcaggtggacgatctggtgagcgagatccacgcg
gtcatcgccagcggctggcgggtactggtgaccaccttgaccaagcgtatggcggaggat
ctcagcgattatctacacgagctgggcatccagtgccgctacctacactccgacatcgaa
acggtggagcgggtggagatcattcgcgacctgcgtgcgggggtcttcgacgtgctcatt
ggcatcaacctcctgcgcgagggcctggacatgccggaggtggctctggtagccattctg
gacgccgataaggagggcttcctgcgttccgaacgttccctcatccagaccatcgggcgc
gctgcccgcaacctccacgggcgcgccatcctctacgccgacaccatcaccggttccatg
gctcgcgccatggaagagacggagcggcgtcgcaacaagcagattcgattcaatgccgag
catggcatcacgcccaagggcattgtcaaaccggtggcggatatcctggaaggcgtctac
cgccgcaatggcagtggcgcacgcaccaaggcggcggagcccactccgacctatgccgac
gtaaaggatccgcgggccctggccaaacgcatccgtgagctggaagagaccatgcatcgc
cacgcgcgcaatctggaattcgagcaggccgctgcccttcgcgaccagatccggatcctg
gaggcggaaatccttgggttggatgtggaggtggacctggtggcggattga
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