Acidithiobacillus caldus SM-1: Atc_1968
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Entry
Atc_1968 CDS
T01581
Name
(GenBank) DNA-directed RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
acu
Acidithiobacillus caldus SM-1
Pathway
acu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Atc_1968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acu03021
]
Atc_1968
03400 DNA repair and recombination proteins [BR:
acu03400
]
Atc_1968
Enzymes [BR:
acu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Atc_1968
Transcription machinery [BR:
acu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Atc_1968
DNA repair and recombination proteins [BR:
acu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Atc_1968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AEK58616
UniProt:
F9ZQ04
LinkDB
All DBs
Position
complement(2011677..2011952)
Genome browser
AA seq
91 aa
AA seq
DB search
MARITVEDCLANLDNRFELTLVAARRARQLAGGATPYVEVGRDKNTVVALREIAEGLVGR
SILDEQDPPPLSSFPGASRREALRVEDATGD
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaatcacggtggaagattgtctggccaatctggacaatcgctttgaattgacc
ctggtggcggcgcggcgggcgcggcagctggctgggggtgcgacgccctacgtcgaggtg
gggcgggacaagaatacggtggtggccctgcgcgagattgccgagggtctggtgggtcgc
tcgattctggatgagcaggatccaccgcccttgagcagcttccccggcgccagtcgccgt
gaagccctgcgggtagaggatgcaaccggcgactga
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