Acidithiobacillus caldus SM-1: Atc_2108
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Entry
Atc_2108 CDS
T01581
Name
(GenBank) putative ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
acu
Acidithiobacillus caldus SM-1
Brite
KEGG Orthology (KO) [BR:
acu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acu03400
]
Atc_2108
DNA repair and recombination proteins [BR:
acu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Atc_2108
Archaeal homologous recombinant proteins
Atc_2108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
MutS_V
Prefoldin_2
AAA_15
RsgA_GTPase
AAA_13
Motif
Other DBs
NCBI-ProteinID:
AEK58756
UniProt:
F9ZRX2
LinkDB
All DBs
Position
2152898..2155339
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AA seq
813 aa
AA seq
DB search
MKPLKLTLTGFAGIRSGSGKESITLDLQSLVPDDAALVAIVGPNGAGKSTIMDNLHPYRV
MPSRNGGSYSPAAFSFYDQLFGDSGSKELTFEHGGVQYRSLLQFQNGKRRKTEAYLFVVD
ENGESTPASTADGLVSDGKTESYDQVLESVMGSAETFFTSVFSAQNRKPLSSYGNAEIKT
LMAELLGLDSIRALGQQAGDVFRLCKAELGRQQEALSQYLLAQEHQEHATRQIQTLEATL
QARQAQRAETAQQLRDAEREQAVLQAQLQQSEEARNRKTRLEHRIQELEAREKQLQEQSV
QKQDRERQQHAQMVNALRSEIREAQNLLHQDQAEREKLQTLQKKAPAIQAAVAKEQTLRS
ELEAAQRKLEQAEAGIRRRRAQADALQAELVQLSGTQSRLSTTGENLKRQLQETEQQARR
IREVPCAGTELSDRCPLLGDARQAEEKIPPLRISLETLREQYRTAKAERQQKESERQALL
AEDPEWQTLKKGLSTLQEQVEALRPLVLEASLLEQAEQHIGQLEVRIQQAETGIRTKTQR
ITELESHLAEQLNVLERETAEEVHQCVLEKQRLIEEVQAIVVPDTSTYQAMAQKVASLND
RIATVEAQITALQNELVNQKAELQAMTERSRGIAETERLVAALNQELGYWAQLGKALGND
GIIALSIDDVGPTLSGYANDLLLAAYGPRFSLSIHTQVTTAKGDTREGFDIVVFDANTQE
GNSVDKMSGGERVWINEAMTRAIALFLAKESGQSYATLFTDEADGALDPDRKRRFMEMKR
EVLKLGNYEREYFVSQTPELWEMADYKIEITAI
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccctgaaattgaccttgactggctttgccgggatccgctccggaagcggcaag
gagagcatcacactggacctccagtctctggtacccgacgatgcggccctggtggcgatt
gtgggtcccaacggcgcaggtaaatccacgatcatggataatctgcacccctatcgggtc
atgccgagtcgcaacggcggctcctatagccccgcagctttcagcttctacgaccaatta
ttcggcgatagcggcagcaaggaacttacgttcgaacacggtggtgtgcaataccgttcc
ctgttgcaattccagaatggtaagcggcgaaagaccgaagcctatctatttgtggtggat
gagaacggggagtccaccccggccagtaccgcggacgggttagtgtccgatggaaaaaca
gaatcctacgaccaagtgctggaaagcgtgatgggcagtgcggaaaccttttttaccagc
gtattttccgcgcaaaaccgcaagccgctgtccagttatggcaatgcggagatcaagact
ctgatggcggaactgctcggcctggattccatccgggccttgggccaacaggccggcgac
gtgttccggctctgcaaagccgaactgggtcggcaacaggaggccctgagtcaataccta
ctggcccaggaacaccaggagcacgccacacgacagatacagaccctggaagcaacgctg
caggcccggcaggcgcaacgggcagaaacggcacagcaactgcgcgatgcggagcgggaa
caggccgtcttgcaggcacagttgcagcaaagcgaggaagcgagaaatcgcaagacccgt
ttggaacaccgcatccaggaattggaggctcgcgaaaaacaactgcaggagcaaagcgtc
cagaagcaggaccgggagcgccagcagcatgcgcagatggtcaacgcgctgcgctcggaa
attcgggaggcacaaaacctcctgcatcaggaccaggccgagcgggagaaattgcagacg
ttgcaaaaaaaagcgccggccattcaggccgctgtcgcaaaagagcaaaccctccgctcg
gaactggaagcggcgcaacggaagctggaacaagcagaagcggggatccggcgtcggcgt
gcgcaagcggatgctttgcaagccgaactggtgcagctttcgggcacccaaagccggttg
agcaccaccggcgaaaatctgaaacgccaactccaggagacggaacagcaggcccgtcgc
attcgggaggttccctgtgcgggcaccgaactctccgaccgttgtcccctcctgggagat
gcacggcaggcagaggaaaagatcccgcccttacgcatctccctggagaccctgcgggaa
caataccgcacggcaaaggcggaacggcagcaaaaggaatcggaaaggcaggccttgctg
gccgaagaccctgagtggcagaccctgaaaaaggggctgtccacgttacaggaacaagtc
gaagcgcttcgtcctctggttctggaagcctcactgctggaacaggcggagcaacacatc
gggcaattggaggtgcgcatccagcaagcagaaaccggcatacgcaccaaaacgcagcgc
atcacggaactggaaagccatctcgctgagcaactcaatgtcctcgagcgggaaaccgcc
gaagaagtgcaccaatgcgtgctggaaaagcagcggttgatcgaggaagtgcaggccatt
gtggttcccgacacgtccacctaccaggccatggcgcaaaaggtagccagcctgaacgac
cgtatcgccacggtggaggcccaaatcaccgcgttacagaacgagctagtcaaccaaaag
gcggagctacaggccatgaccgagcggtcccgcggtatcgccgaaacggagcgcctggtg
gcggccctcaaccaggaactggggtattgggcgcagttgggcaaagcgttggggaacgac
ggcatcatcgcgctatcgatagacgatgttggtcctaccctgtccgggtacgccaatgac
ctgctcctggccgcctatggaccgcgctttagcctctccatccacacgcaggtcaccacg
gccaagggagacactcgagagggtttcgatatcgtcgtcttcgatgccaacacccaggag
ggaaacagcgtcgataagatgtccggcggtgagcgcgtctggatcaacgaagccatgacc
cgggccatcgccctgttcctggccaaggaatcgggccaatcctacgccacactctttacg
gatgaggcggatggtgcccttgaccccgaccgcaagcgccgtttcatggaaatgaagcgg
gaggtactcaagctcggaaattacgagcgggaatacttcgtcagccagactcctgaattg
tgggaaatggccgactacaaaattgagataaccgcaatctag
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