Acidithiobacillus caldus SM-1: Atc_2174
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Entry
Atc_2174 CDS
T01581
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
acu
Acidithiobacillus caldus SM-1
Brite
KEGG Orthology (KO) [BR:
acu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acu03016
]
Atc_2174
Enzymes [BR:
acu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Atc_2174
Transfer RNA biogenesis [BR:
acu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Atc_2174
Prokaryotic type
Atc_2174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AEK58822
UniProt:
F9ZS13
LinkDB
All DBs
Position
complement(2224386..2225006)
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AA seq
206 aa
AA seq
DB search
MVHFDAPVTRPALAWTRGVNRYLPSSISVLWARPVPRDFHARFAAVGRRYRYCILNRSER
SALYAGRAAWVPRPLAVEPMQEAASLLLGRHDFSAFRAAACQAKHPIRELRQLRVSRQGD
WVFVDAEANAFLHHMVRNLVGVLLGIGWGDRPPHWAAEVLASRKRALAGVTAPAEGLYFV
AALYPPAFALPTLDFHQLHTLFPPSC
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
gtggtgcatttcgatgctccggtgacccgtccggccctcgcctggacgcggggggtcaac
cgctatcttccctccagtatcagtgtgctctgggcgcggcccgtcccccgggattttcac
gcgcgctttgctgccgttgggcggcgttatcggtattgcattctcaatcgcagcgaacgc
tcggcactgtatgccgggcgcgcggcctgggtgccgcggcctctggcggtggagcccatg
caggaagccgccagcctgctcttgggcagacacgatttttcggcctttcgcgccgctgcc
tgtcaggccaaacaccccatcagggaattacgccagttgcgggtgagccgtcagggcgac
tgggttttcgtggatgccgaggccaatgcctttctccaccacatggtgcgcaacctcgtc
ggcgtgctgctgggcattggctggggtgaccgaccgccccactgggcggcggaggtgctg
gcgtcgcgcaagcgcgcgctggcgggggtaaccgctccggccgaagggctctatttcgtc
gccgccctctatccgcctgcctttgccttgcctaccctggatttccaccaattgcatacc
ctcttcccgccatcgtgttag
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