Acidithiobacillus caldus SM-1: Atc_2297
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Entry
Atc_2297 CDS
T01581
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
acu
Acidithiobacillus caldus SM-1
Pathway
acu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Atc_2297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acu03400
]
Atc_2297
DNA repair and recombination proteins [BR:
acu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Atc_2297
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Atc_2297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Planc_extracel
Motif
Other DBs
NCBI-ProteinID:
AEK58945
UniProt:
F9ZRE7
LinkDB
All DBs
Position
complement(2356218..2356964)
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AA seq
248 aa
AA seq
DB search
METEGEDHAFVLHRYPFSDSSLVLEVITAGHGRLGLLARGARRPRSALGGLEAGRPFVLR
WRGRGELPTLVSADEVAPARLPGPWQGLCLFYVNELVLRLTVRNDPVPELFAAYAEVLED
LWAGARATWHLRRFEQRLLRALGWAADLPYCTVCGTAWKPGSDAWSQGPGAAPRCPLHAE
PGGLILTDAMIQWLSGSMIQAPVSSIQDPLRRYLRAQIDELLDGRPLESRRLLAAYLRRQ
KDSGRQTW
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggagactgagggcgaagaccacgcttttgtcctgcatcgttaccccttttccgacagc
agcctggtgctggaggtaatcaccgctggtcacgggcgtctgggtctcttggcgcgcggc
gcgcgcagaccgcgttcggccctgggcggtctcgaagctgggcgcccctttgtgctgcgc
tggcgtggccggggcgaactaccgaccctggtgagtgccgacgaagtggctccggcgcgc
ctgcccggtccctggcaggggctctgccttttttacgtcaacgaactggtgctgcgactc
acggtacgcaacgaccccgtaccggaacttttcgcggcctatgccgaggtgctggaggac
ctgtgggcgggtgcccgggcgacctggcatttgcgccgcttcgagcaacgactgcttcgg
gcgctgggctgggcggcggacctgccgtactgtaccgtctgcggcacggcctggaagcca
ggctcggatgcctggagccaaggccctggggcggccccgcgctgtccgctccacgccgag
cctgggggtctgatccttacggatgccatgatccagtggttgagcggcagcatgatacaa
gcgccagtatcctccattcaggaccccctgcggcgctatctgcgggcccagatcgacgag
ctcctggacggacgcccactggagagtcgtcggctccttgcggcatacttacggcggcaa
aaggattcggggagacaaacatggtag
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integrated database retrieval system
