Acidithiobacillus caldus SM-1: Atc_2444
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Entry
Atc_2444 CDS
T01581
Name
(GenBank) Membrane-bound lytic murein transglycosylase D precursor
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
acu
Acidithiobacillus caldus SM-1
Brite
KEGG Orthology (KO) [BR:
acu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
acu01011
]
Atc_2444
Enzymes [BR:
acu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Atc_2444
Peptidoglycan biosynthesis and degradation proteins [BR:
acu01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Atc_2444
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_RLK
LysM1_NFP_LYK
NMB0315_dom_I
LysM3_NFP
Motif
Other DBs
NCBI-ProteinID:
AEK59092
UniProt:
F9ZRS7
LinkDB
All DBs
Position
2501450..2503291
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AA seq
613 aa
AA seq
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MAWAAPQDIGLHTTEPSQGLSAALQQLSQDADPGAAGPQNLNLTTATDPSFQGGDAATTS
GNGFGSATGGGGLMAAVESLRSSDPLLEKSDDGRVWTTIVQGFRISKVSRSEVDQWRSWF
LQHQGKLEQILNNSRPFLYYVATAVAQRGMPMELALLPAIESGYNPKAFSPAAAAGLWQF
VPGTARNFGLQNTRWGDPRLSLTASTNAALDYLSYLYNYFGGNWLLAIAAYNAGQGTVSA
AIQRNVAAGKPTDFWSLNLPQETENYVAELLGLAQVIENAKAYHVRLPAIPNQAHIAVVN
TPKSVALDVAAKLMDMPVSELQHLNAGLSYGVAPADYPLVVPKNKATQFKEALLTLPEAA
PAPQPAPVQAPAPAPHLRYVAVRPGDTLSALAQRYGVQVAQLQRWNHIASARALRVGQRL
VVYGGSVAVPQSAGGTVTVRPGESLWQIAQRTGVSVTALARANGLSQASMLHPGQVLQLP
GGSAPAQATPAVYTARAGSITVRPGESLWQIAQRAGLSVTALERANGLNGSSMLHPGQVL
RLPAADTEVAAISSAQERAATRPHPTTYVVRPGDSVWQIAQRFHVSPKAVIQWNRLASAQ
DIRPGTHLTIYTR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcctgggcggcacctcaagacataggtctgcacactaccgagccgtctcagggtctc
agcgcggcgctgcaacagctgtcccaggatgccgatcccggagcagccgggccgcagaat
ctgaacctcacgacggcgacggatccctcgttccagggaggcgacgccgccaccacatcc
ggcaacgggtttgggtccgctacgggcggtggcggtctcatggctgcggtggagtccctg
cgttccagtgacccactcctggaaaaatccgacgacggtcgggtgtggacgaccatcgta
cagggttttcgtatcagcaaggtgtcgcgcagcgaggtggatcagtggcgcagttggttc
ttgcagcatcagggcaaactcgagcagatcctgaacaactcgcgcccctttctctactat
gtggccaccgccgtggcacagcggggcatgcccatggaactggcgctcttgcccgccatc
gagagtggctacaaccccaaggccttttccccggcggcggccgcgggcctatggcagttc
gtgccgggaacggcgcgcaactttggcctgcagaatacccgctggggcgatccgcgtctg
agtctgacggcctctaccaatgcggcgctcgattatctctcctacctctacaactacttc
ggcggcaactggctgttggccatcgcggcctataacgccggacagggtacggtatcggcg
gccatccagcgcaacgtcgccgccggcaagcccacggacttctggagcctcaacctgcct
caggaaaccgaaaactacgtggcggaactgctcgggctcgcccaggtcatcgagaacgcc
aaggcctaccacgttcgtttgccggccatccccaaccaggcgcacatagcggtggtcaac
acacccaagagcgtggcactcgatgtggcggccaagctcatggacatgcccgtgagcgag
ctgcagcacctcaatgccggcttgagctacggtgtcgcccctgccgattatccgctggtg
gtacccaagaacaaggcgacgcagttcaaggaagcgttattgaccctgcccgaggccgcc
ccggcgccacaaccggcacccgtacaggctccggcgcccgccccgcacttgcgctatgtc
gccgttcggccaggggacaccctgtcggccctggcgcaacgctacggggttcaggtcgcc
cagttgcagcgctggaatcacattgcctcggcgcgcgccctacgcgtcggtcagcgcctg
gtcgtctacggcggctctgtggcggttccccagagtgccggtggtaccgtgaccgttcgc
ccaggcgagagcctgtggcagatcgcccagcgcaccggagtgagtgtgacggccttggcg
cgagccaatggtctgagccaagccagcatgctgcatccggggcaggtgttgcaactgccc
ggtggtagcgctccggctcaggccacccccgccgtctacacggcacgtgccgggagcatc
accgtccgccccggcgaaagcctctggcagatcgcccagcgcgccggtctcagtgtcacc
gccctggagcgtgccaatggtctcaacggttccagcatgttgcatccaggccaggtgctg
cgtctgccggcagcggatacggaagtagcggccatcagttcggcacaggaacgggcggct
accaggccgcatcccaccacctatgtggtgcgtcccggggacagcgtctggcagatcgcc
cagcgctttcacgtctcgcccaaggcggtgattcagtggaaccgcctggcctcggcccag
gacattcgtcccgggacgcatctcaccatctacacgcgttga
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