Acidithiobacillus caldus SM-1: Atc_2460
Help
Entry
Atc_2460 CDS
T01581
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
acu
Acidithiobacillus caldus SM-1
Pathway
acu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Atc_2460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acu03019
]
Atc_2460
03016 Transfer RNA biogenesis [BR:
acu03016
]
Atc_2460
Enzymes [BR:
acu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Atc_2460
Messenger RNA biogenesis [BR:
acu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Atc_2460
Transfer RNA biogenesis [BR:
acu03016
]
Prokaryotic type
tRNA degradation factors
Atc_2460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_2
S1_2
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
AEK59108
UniProt:
F9ZRU3
LinkDB
All DBs
Position
complement(2516387..2518465)
Genome browser
AA seq
692 aa
AA seq
DB search
MSIVRKEVDFGGQRLCLETGRMARQADGAVLVTLGETMVLVTAVGRRELKPGQDFFPLTV
NYQEKAYAAGRIPGGFFKREGRPTEKETLTSRLIDRPLRPLFPKGFLNEVQVIATVLSVD
QENDPDIPAMIGASAALAISGIPFQGPIGAARVGYVDGDFVLNPSFSALARSQLDLVVAG
TRQAVLMVESEAQELPEATMLSAVMFGHESFQPVIACIEELAAEAGKTPWAWQAPELDPA
LQEAITQAALAPLREAYGLVEKQARSKRLDEIRSSLLEQFGGSAGEQADVVRGVVKKLET
QIVRGRVLDGAPRIDGRDRTTVRPIEIEVGIMPRTHGSALFTRGETQALVIATLGTKGDE
QIVDALQGESRDRFMLHYNFPPFSTGETGMVGSPKRREIGHGRLAKRAVAAVLPSESEFP
YSLRIVSEILESNGSSSMATVCGASLALMDAGVPLKAPVAGVAMGLIKDGERYAVLTDIL
GDEDHLGDMDFKVAGTENGVTALQMDIKIDGITREIMATALEQAHAGRLHILSKMNAVLA
QGRSQLSGYAPRIISMRIHPDRIRDVIGPGGKVIRALTEETGASIDIQDDGTVTIASVNG
EAGEAARRRIELLTADVEVGMIYDGKVAKIMDFGAFVTILPGRDGLLHISQISTERVNDV
HDYVKEGQSVRVKVLEVDRQGKIKLSMKDIAQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
ttgagcatagtgcgcaaggaagtggatttcggtgggcagcgtctttgcctagagacggga
aggatggcacgccaggcggatggggcagtcctggtcacccttggagagaccatggtgctg
gtcaccgccgtcggtcgccgcgagctgaaaccgggacaggatttctttccgctgaccgtg
aattatcaggaaaaggcctatgctgcaggccgtattcccggggggtttttcaagcgggaa
gggcggcctaccgaaaaggaaaccctgacctctcgtctcatagatcgacccctgcggcct
ctgttcccgaagggcttcctcaacgaggtgcaggtcatcgccaccgtactgtccgtggat
caggaaaacgatccggacattccggccatgatcggcgcgtcggcggccctggccatctcc
ggcatacccttccaggggcccatcggcgccgcacgggtgggctatgtggacggagatttc
gttctcaatccgagtttttcggccctcgcccgctcgcaactggatctggtagtggcggga
acgcgccaggcggtgctgatggtggagtccgaggcgcaggaactgcccgaagcgaccatg
ctgtcggcggtgatgttcggtcatgagtccttccaacccgtgatcgcctgcatcgaggaa
ctggcagccgaggcgggcaagaccccctgggcatggcaggcacccgaactggatccggcc
ttgcaggaggccattacgcaggcggcgttggcgcccttgcgcgaggcctatggtctcgtg
gagaaacaagcacgcagcaagcgtctcgacgagattcgcagtagtctgctggagcagttc
gggggcagcgccggtgagcaggccgatgtggtgcgcggcgtcgtcaagaaactggagacg
cagatagtccgtggtcgagtgctggacggagccccgcgcatcgacggacgggatcgcacc
acggtgcggcccatagagatcgaggtgggcatcatgccccgcacccacggttccgccctt
ttcacgcggggcgagacccaggcactggtcatcgctaccttggggaccaagggcgacgaa
cagatcgtcgacgccctgcagggggaaagccgcgaccgcttcatgctgcactacaatttt
ccgcccttctccaccggggagacgggcatggtgggctctcccaagcgccgagaaatcggc
cacggccggctggccaagcgggcggtggcggcggtgctgcccagcgaatccgagtttccc
tacagtctgcgcatcgtctccgagatcctggagtccaatggttcttccagtatggcgacg
gtgtgtggtgcgtccctggctctcatggatgccggcgtgcccctgaaggcaccggtggcg
ggagtggccatggggctcatcaaggacggggagcgctacgccgtcctcaccgacatcctc
ggcgatgaggatcatctgggcgacatggatttcaaggtggcgggcaccgagaatggggtg
accgccctacagatggacatcaagatcgacggtatcacccgggagatcatggcgacggcc
ttggagcaggcgcacgccgggcgtctgcacatcctttcgaagatgaatgcggtgctggcg
cagggacggtcgcaattgtccggctatgcgccgcgcatcatctccatgcgtatccacccg
gaccgtatccgcgatgtcatcggtcctggcggcaaggtcatccgtgcccttaccgaggag
acgggtgccagcatcgatattcaggacgatggcaccgtgaccatcgcctcggtcaacggc
gaggccggtgaggccgcacggcgccgcatcgaactgctcacggcggatgtggaggtgggc
atgatctacgacggtaaggtggccaagatcatggatttcggcgccttcgtcacgatcctg
ccgggacgggatggtctgctccatatctcccagatcagcaccgagcgggtcaacgacgtg
cacgactacgtcaaggaagggcagagtgtgcgggtcaaggtgctggaagtggatcgtcag
ggcaagatcaagctcagcatgaaggatatcgcccaatag
DBGET
integrated database retrieval system
