Acidithiobacillus caldus SM-1: Atc_2462
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Entry
Atc_2462 CDS
T01581
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
acu
Acidithiobacillus caldus SM-1
Brite
KEGG Orthology (KO) [BR:
acu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acu03016
]
Atc_2462
Enzymes [BR:
acu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Atc_2462
Transfer RNA biogenesis [BR:
acu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Atc_2462
Prokaryotic type
Atc_2462
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AEK59110
UniProt:
F9ZRU5
LinkDB
All DBs
Position
complement(2518818..2519699)
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AA seq
293 aa
AA seq
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MNCRHGILLLDKDEGLTSNAALQRAKRLMGSKKAGHTGTLDPFATGLLVLLFGEATKVSD
YILNADKRYLATLRLGVETRTGDREGEVVQRREVNLGDAEIAAALAAFRGDIQQIPPMHS
AIKQGGKPLYVLARQGVEVERAPRSVRIHRLEMLSRSGSDLVLDIHCSKGTYIRSLAQDL
GRALGCGAHIVQLRRLETGPFAIDSALTLAQLEASLATGDCPLQPMDLALSTLPAVHLSE
NSAYYLQRGQGVVVAHAPPPGRIRLYGPHSEFLGLGEVMDDGKVAPRRLMGVN
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgaattgtcgtcacggtatactgctgctggacaaggatgaaggtctgacctccaatgcc
gccctgcagcgcgccaagcgcctcatgggcagcaagaaagcaggtcatacgggaaccctc
gatccctttgccacggggcttttggtcctgctttttggcgaggccaccaaggtatcggac
tacattctcaatgccgacaagcgctatcttgccaccctgcgcctgggggtggaaacgcgc
acgggggaccgcgagggagaagtcgtccagcggcgcgaggtcaatctgggcgatgccgag
atcgccgcggccctggccgccttccgcggcgatattcagcagattccgcccatgcactcg
gccatcaagcagggggggaaacccttgtatgtcctggcgcgtcaaggcgtggaggtagaa
cgggcgccgcgttcggtgcgtattcatcgactggagatgctgtcccgctcgggcagcgat
ctggtcctcgatatccactgctccaaaggcacctacattcgcagtctggcccaggatctg
ggacgagcgctgggctgcggcgcccacatcgtgcaactgcggcgtctggagacgggaccc
ttcgccatcgacagcgcccttaccctggcgcagttggaggcgagccttgccaccggcgac
tgtccgctgcagcccatggatcttgcgctgagtacgttgccggcggtccatctctcggaa
aatagtgcgtattatctgcaacgcggtcagggggtggtggttgcccatgcgccgcctccg
ggtcgaattcgtctgtacgggccacattcggagtttctcggtctgggcgaggtcatggac
gatggaaaagtggcgcctcggcgtctcatgggcgtaaactaa
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