Acidithiobacillus caldus SM-1: Atc_2483
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Entry
Atc_2483 CDS
T01581
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
acu
Acidithiobacillus caldus SM-1
Brite
KEGG Orthology (KO) [BR:
acu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acu03016
]
Atc_2483
Enzymes [BR:
acu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Atc_2483
Transfer RNA biogenesis [BR:
acu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Atc_2483
Prokaryotic type
Atc_2483
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AEK59130
UniProt:
F9ZRG2
LinkDB
All DBs
Position
complement(2544244..2545311)
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AA seq
355 aa
AA seq
DB search
MISGLERQYPRLDEDIGGVLRRGPDTFFVQELLPFQPSGVGEHVFLHIEKCGLNTEEVAR
RLARHAGVHVRDIGYAGLKDRHARTRQFFTVPVPGRAEPDWTVLENEHLKILERHRHDRK
LRRGAHLGNRFRLSLRVLRGSRRDWDVALHRLERLGFPNYFGGQRFGHDNLAAAARLLAG
TGQRLQRGQRGLLWSAARSALFNAVLTERVRTGSWQTLLPGERVQLEGSHSHFLARRSDA
DWSALEARLHAWDLHPSGPLPGSGTDGPEDEAAQVEQAALAAWMGPPEFPENGLSWADRL
GAQGLRAARRALRCRVRECSWEWVDDEGLDLRFSLPSGSFATVALEALGVQTQAR
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgattagcggcctggagcgccagtatcccaggctggacgaggacatcggcggagttctc
cggcgtgggccggataccttcttcgtccaggaactgctcccctttcaacccagcggcgtg
ggtgagcatgtcttcttgcacatagaaaaatgtggcctcaacaccgaggaggtggcgcgt
cgtctcgcccgtcatgccggtgtccatgtgcgcgacatcggctacgccggcctcaaggat
cgccacgcccggactcgccagttttttaccgtccccgtgccgggcagggccgagccagac
tggacggtgctggaaaacgaacacctgaagattttggaacgccatcgccacgatcgcaag
ctgcgccgcggggcgcacctgggcaatcgctttcgcctgtcccttcgggtactgcgtggc
agtcgccgggactgggacgtagcgctacaccgtctggagcgtctgggattccccaattat
tttgggggccagcgcttcggtcacgataatcttgctgcagctgcccggctccttgccggt
accggccagcgtctgcagcgcgggcagcggggccttttgtggtcggcggcgcgatcggcg
ctgttcaatgccgtcttgaccgagcgtgtacgcacgggcagttggcagactctgctcccg
ggagagcgtgtgcagctcgagggttcgcacagtcattttcttgcccgacggagcgacgcg
gactggtccgcgctcgaggcgcgtctgcacgcttgggatctgcaccccagcggtcctttg
cccgggtcgggtaccgacggccccgaggacgaagcggcgcaggtggagcaagcggcgctg
gcggcctggatggggccgccggagttccccgagaacggactatcctgggccgatcgcctc
ggcgcgcagggcttgcgggcagcacggcgggcgctgcgttgtcgtgtgcgggagtgctcc
tgggagtgggtcgacgacgagggcctcgacctgcgtttctccctgccctccggcagcttt
gctacggtggctctggaggccctaggcgtgcagacccaggctcgatga
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