Acidithiobacillus caldus SM-1: Atc_2510
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Entry
Atc_2510 CDS
T01581
Name
(GenBank) deoxyribodipyrimidine photolyase-like protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
acu
Acidithiobacillus caldus SM-1
Brite
KEGG Orthology (KO) [BR:
acu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acu03400
]
Atc_2510
Enzymes [BR:
acu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
Atc_2510
DNA repair and recombination proteins [BR:
acu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
Atc_2510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AEK59157
UniProt:
F9ZSE9
LinkDB
All DBs
Position
complement(2567891..2569438)
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AA seq
515 aa
AA seq
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MSKPVRRLVLLLGDHLDLHSPHLATVDPERDLCLLVEARAEAQRVWSHKARIALFLSAMR
HGAEALRQRGLRVEYWALAEHPYDDLVTAVAAALRRFAPQRLALHEPGTWALAEGLRDLA
NAAGTEFELWPASQFLFTREEFQSWAGAQRQHRMEFWYRHARRRTGILMEGDQPLGGRWN
YDSENRHSFGKAGPGWLPEPLAFAPDAITREVLTVVEREFPDHPGSLAHFDWPVTMIEAE
AALEDFIAQRLPSFGSFQDASWPGAVWLYHSRLSAAMNLGLLHPQRVIEAALGAHARAEA
SLAATEGFVRQILGWREFVRGIYWRYMPDYLEENALGAEQPLPQFYWSAQTDMACLRDVL
QRTLDYGYAHHIERLMITGLFALLLGVAPKAIHAWYLAIYVDAVEWVELPNVLGMSQYAD
GGRVASKPYVASGHYIARMTGHCARCPYRPQERVGAKACPFTTLYWDFLIRHADPFARHP
RTALQWKHLESLDAATRAEIQQAANKLRETWAKGV
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagccggtgcgccgtctggtgctgctcttgggggatcatctggacctgcacagc
ccgcatctcgccacggtagatcccgagcgagatctgtgcctgctggtggaagcgcgcgcc
gaagcgcagcgcgtgtggtcgcacaaggcgcgaattgccctctttctcagcgccatgcgc
catggtgccgaggccctgcgccagcgcggtctgcgggtggaatactgggcgctggcggaa
catccttacgacgacctggtgacggcggtagcggctgccctacgacggtttgccccacag
cgattggccctgcacgagccggggacctgggcattggccgaggggctgcgggacctggcc
aacgccgctggaacggagttcgagctctggccggcaagccagtttctctttacccgggag
gagttccagagctgggccggagcgcagcgtcagcatcgcatggaattctggtaccgccac
gcgcgtcgacgcaccgggatactcatggagggcgatcagcccctcggcggccgttggaat
tacgacagcgagaaccgccacagttttggcaaggctggaccgggctggttaccggaacca
ctggcctttgccccagacgccattacccgggaggtattgaccgtggtggagcgagagttc
ccggatcatcccggcagcctcgcgcacttcgactggccagtgaccatgatcgaggccgag
gccgcactggaggatttcatcgcccagcggctgccgagcttcggcagttttcaggatgca
tcctggcccggcgcagtgtggctctatcactcgcgcctgtccgccgccatgaatcttggg
ctgctgcatccgcaacgggtcatcgaggcggccttgggtgcccacgccagggccgaggca
agccttgcggccaccgagggtttcgtgcgccagatcctcggctggcgggaattcgtgcgt
ggtatctactggcgctacatgcccgactatctagaggagaatgccctgggcgcggagcag
cccctgccgcagttctattggtcggcgcagacagacatggcctgtctgcgggatgtgctg
caacggaccctggattacggctatgcccaccacatcgagcgcctcatgatcacgggcctc
tttgccttgctcctgggggtagcacccaaggcgattcacgcctggtacctggccatctat
gtagacgccgtggagtgggtggaattgcccaatgttctgggtatgtcgcaatacgccgat
ggcgggcgggtcgcctccaaaccctatgtggccagtggccattatatcgcgcgcatgacc
ggccattgtgcccgctgtccctatcgaccgcaggagcgtgtcggcgccaaggcctgtcct
ttcaccaccttgtactgggatttcctgatacgccatgccgacccctttgcccgccacccg
cgcacggccctgcagtggaagcacctggaatctctggatgcggcaacgcgcgccgagatc
cagcaagcggccaataagctgagggaaacctgggcgaagggcgtctga
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