Acidithiobacillus caldus SM-1: Atc_m059
Help
Entry
Atc_m059 CDS
T01581
Name
(GenBank) diguanylate cyclase/phosphodiesterase
Organism
acu
Acidithiobacillus caldus SM-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
CZB
dCache_1
Motif
Other DBs
NCBI-ProteinID:
AEK59590
UniProt:
F9ZUM4
LinkDB
All DBs
Position
megaplasmid:54579..57308
Genome browser
AA seq
909 aa
AA seq
DB search
MNLKTIPKIPAFLTRPITIPPYRWTMSLVFWGTFAGALAFSGWYAWFSWHRYEQNSQYRL
TLESDMVATVAQKLLDGHASALQLLGVQLQRADALHHPRRARTLLLDYQKATSGIASANL
ITPNGRVIASTAVPAGNVPPDFRNNPAIWPGFQKVLRTHGIWVYHPLRGPLVDSHWVIRL
SHTVFSPAGKPLFVVATPLRFNAIEDFLRQLPLRPGTAVGLIRSDLYIEGRWPIPQGNLS
KMLAHPVSVGALLKALQRDPHARQGSYAGFVTVDHTYRFGAFTRLDHYPLTAFVSIPRDS
WLAAWWRRQIQYPLVFLLITLGFGMVAYRRILFLDRRWDLQRQTFERTLTTQATHDGLTN
LPNRDGLRLVFDQALARAERQERLLAVGFLDLDAFKPVNDTYGHAAGDDLLKEIARRLQD
AVRRTDIVARLGGDEFVLLLEGLRGMDELDQVLARLQAAIAQPFMIKGKEISLQASLGLT
IYPFDESDADLLLRHADQAMYAAKACPGRASEGWAQLYHPDLGTITMGDEILRRDFLQAL
VAGEVTLRYQPLVALATGRVAGLEALTRWHREGREKISPDRFLPSLGVRERQALGHFVLQ
TGLQQLAQWRDMGLDLFLSVNVTPEEFDSPGFADSVLGILAAYPGIPPESLVLEVLEIGE
ILEQEVALEHLQRLRGAGVKIALDDVGSAYASLLRLKNLPIDEIKIDQGFIRELSNKPQD
LIFVESLVSLGLAMGVLITVEGVETEAHIALLREMKINYLQGYAIAKPLEAEAVADFVRT
FVLGAGDADTPMLALYQHLGWVRAAEESAINHGIYAYAELAACPLTTWLHAHAAELSGVE
ALLVEHEAVHALGREIFQIRQNGTREELHRLLGQLHVYSHRFQEGLGQAVKTMRENAEAK
APPPEGANQ
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
ttgaatttgaaaaccatcccgaaaattcccgcgtttcttacccgtcccatcactatacct
ccctatcggtggaccatgtctctggtcttttggggaacattcgcgggggcgttggccttt
tctggatggtatgcctggttctcctggcatcgctacgagcagaacagtcagtatcgtctg
acgctggaatccgacatggtcgcaaccgtcgctcagaagctgctggacgggcacgcctct
gcgctccagcttttgggggtgcagttacagcgcgcagacgcgctccatcatccgcgccgc
gcccggacgctcctgctcgattatcagaaggccacctcggggattgccagcgcgaatctc
atcacacctaatggacgggtcattgcctccacggccgtaccggcggggaatgtgcccccg
gattttcgtaacaatccggccatctggcctggttttcagaaagtcttgcggacacatggc
atatgggtctaccacccgcttcgtggcccgctggtggacagtcattgggtcatccgcctg
agtcatacggtattttccccggcgggaaaacccctgtttgtggtggccacgccgctgcgc
ttcaatgctattgaagacttcttgcgccagttgcccttgcgacccggaacggctgtcggc
ctgatccggagtgacctttatattgagggacgctggcccatcccccagggcaatctctcc
aagatgcttgcccatccagtatccgtaggagccttgctaaaggcactgcagagggacccc
catgcacggcaaggatcttatgcaggcttcgtcacggtggatcatacctaccgttttggg
gccttcacccgtctcgatcattaccccctgaccgcttttgtttccatccccagggattca
tggctggccgcctggtggcgacgacagattcaataccctctggtctttctgctcatcact
ttgggattcggcatggttgcctatcgacgcatcctcttcctggatcgccgatgggatctg
caacgccagacattcgagcgaactctgaccacgcaggccacccacgacggactgaccaac
ctacccaaccgcgatggcctgcgattggtatttgatcaggcgttagcccgtgctgaacgg
caagaacggttgctagccgtgggcttcttggatctggatgcgttcaagccagtcaatgat
acctacggacacgctgccggtgacgacctgctgaaagaaatagcccgccgcctgcaagac
gctgtgcggcgaacggatatcgtggcgcgcttggggggtgatgagtttgtgctattactg
gaaggcctgcgcggtatggatgaactggatcaggtcctggcccgtctccaagcggcgatt
gcccagcccttcatgatcaaggggaaggagatcagcctccaggcgagtctgggactgact
atctaccccttcgacgagagtgacgccgacctgcttctgcggcacgcggatcaggctatg
tacgccgccaaggcgtgccccggacgtgcgagcgaaggttgggcgcagctctatcacccg
gatctcggcaccatcaccatgggcgatgagatattgcgccgggatttcctgcaagctttg
gtcgccggtgaggtgacgctacgttaccagcctctggtggctctggcgacgggccgggtg
gcgggcctcgaggccctgacccgctggcaccgggagggccgggagaagatttcccctgac
cgattcctcccgtcccttggcgtgcgggagcgtcaggcgctggggcacttcgtgctgcaa
acgggactgcagcaactcgcacagtggcgggacatgggcctggatctcttcctcagcgtc
aacgtcactccggaagagttcgacagtcccggatttgccgattcggtccttggcatcctg
gccgcttatccgggcatccccccggaatccctggtgctggaggtgctggaaatcggggaa
atcctcgaacaggaggtcgccctggagcatctgcagcggctgcgcggggcgggcgtcaaa
atcgccctggatgacgtggggagtgcatacgcctccctcctgcgactcaaaaatctgccc
attgacgagatcaaaatcgatcagggtttcatccgcgaactgtcgaacaagccccaggac
ctgattttcgtcgaaagtctcgtcagcctgggtttagcgatgggcgtcctcatcaccgtg
gaaggggtggaaaccgaagcgcatatcgccctcctgcgcgaaatgaagatcaactatctc
caggggtatgccattgccaaaccgctggaggcggaagcggtggcggattttgtgcgcacc
ttcgtcctcggcgccggggatgcggacacgccgatgctggccctgtaccagcatctggga
tgggtgcgtgcggcagaagagtccgcgataaatcatggcatttacgcgtatgcggaactg
gccgcctgtccactcacgacctggttgcacgcccacgcagcagaactgtccggggtagag
gccttgctggtcgagcacgaagcggtgcatgccctaggccgggaaatctttcagatacgg
caaaacggaacgcgtgaggagctccatcgcctgcttggtcagttgcatgtgtatagccat
cgctttcaggaagggctggggcaggcggtgaagaccatgcgggaaaacgcagaggccaag
gcaccacctccagaaggcgccaaccagtaa
DBGET
integrated database retrieval system
